FastQCFastQC Report
Sun 4 Sep 2022
EGAF00000888251

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888251
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences223564
Sequences flagged as poor quality0
Sequence length301
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCCTTTTCCCTTTAACTTTATTATATCCCTCTAAAAATTTCTAAAAT154966.931348517650426No Hit
ACCCCCAAAAAAACCTACTCATAAACGCTTAAAACCCCCACCACCCGCAA139976.260847005779106No Hit
ACTCTAAAAAACCAACTCCTCCAAACAAAAACTCCTAAAACCTCAACAAA136846.120842353867349No Hit
CATAATCACCCACAACAAATTTCCCACCACCAAAATAAACCACCCCCTAA126435.6552038789787265No Hit
AATACCTTAACTCCCTAAAACCCAAATATAAATCAAAAATATCCCAAAAC121115.4172407006494785No Hit
TAAAACTAAACCCCACATACCTTCCTCCAAATATAAAACCACCAAACGCT118525.3013902059365545No Hit
AATACCTAAAAACCCAAAACCCTTCCTCCGTTTTAAAAAAAAAACAACAT117925.274552253493407No Hit
ATACAAAACAAACCCCTATCTCCTCTACCGCGACCTTAAAAAACAATACC111584.990964556010806No Hit
TACTATCCACACTCTCTTACCTCCCAACCCCCACACTCCCTTCTAACACC109264.8871911398973005No Hit
AAACTACAAAATCAAAACCAACCCAAAACCACACCAAACCCCCACAAAAC89714.012721189458053No Hit
TCCAACCAATAACACTATCTCTAACCTCGATTTCCTCATCTATCCTATAA70833.1682202859136535No Hit
TCCAACCAATAACACTATCTCTAACCTCGATTCCCTCATCTATCCTATAA46852.0955967866024943No Hit
AATACCTAAAAACCCAAAACCCTTCCTCCGTTTTAAAAAAAAACAACATT41581.859870104310175No Hit
TAAAACTAAACCCCACATACCTTCCCCAACCCAAACACAACACTAACACA25531.1419548764559588No Hit
AATACCTAAAAACCCAAAACCCTTCCTCCGTTTTAAAAAAAAAAACAACA23241.0395233579646097No Hit
AAACTACAAAATCAAAACCAACCCCATACAACTCCCTAATACCTTGTAGA22300.9974772324703441No Hit
CCCAAAAATTAATAAATAAACCCCAAAAACTAAAAAATAAACGCCAAAAA21800.9751122721010539No Hit
CCCCCCAAAAAAACCTACTCATAAACGCTTAAAACCCCCACCACCCGCAA13760.615483709362867No Hit
CCTCCCTTTTCCCTTTAACTTTATTATATCCCTCTAAAAATTTCTAAAAT13470.6025120323486787No Hit
CCTCTAAAAAACCAACTCCTCCAAACAAAAACTCCTAAAACCTCAACAAA12220.5465996314254531No Hit
CCCAAAAATTAATAAATAAACCACTCACCTACTTAATCTCCCTGTAGAAC9000.402569286647224No Hit
TCCAACCAATAACACTATCTCTAACCTAAACCTATAAACTCACAAAATCA7650.34218389365014046No Hit
CACTCCATTATTCTTATCTTTAATCTCTTTTTATTTATAAAAATCCAATT7000.3131094451700631No Hit
TAAAACTAAACCCCACATACCTTCCAAACCACGAACCCGCAACCCAATCC6300.28179850065305684No Hit
CTACAAAACAAACCCCTATCTCCTCTACCGCGACCTTAAAAAACAATACC6190.276878209371813No Hit
CCCAACCAATAACACTATCTCTAACCTCGATTTCCTCATCTATCCTATAA5810.2598808394911524No Hit
AATACCTAAAAACCCAAAACCCTTCCTCCGTTTTAAAAAAAAAACAACTT5720.2558551466246802No Hit
CAAAACTAAACCCCACATACCTTCCTCCAAATATAAAACCACCAAACGCT4720.21112522588609975No Hit
CACTATCCACACTCTCTTACCTCCCAACCCCCACACTCCCTTCTAACACC4570.20441573777531266No Hit
CAACTACAAAATCAAAACCAACCCAAAACCACACCAAACCCCCACAAAAC4290.19189135996851014No Hit
CATACCTAAAAACCCAAAACCCTTCCTCCGTTTTAAAAAAAAAACAACAT4240.1896548639315811No Hit
AATACCTAAAAACCCAAAACCCTTCCTCCGTTTTAAAAAAAAAAAACAAC4220.1887602655168095No Hit
CATACCTTAACTCCCTAAAACCCAAATATAAATCAAAAATATCCCAAAAC4040.18070887978386502No Hit
AATACCTAAAAACCCAAAACCCTTCCTCCGTTTTAAAAAAAACAACATTT3610.16147501386627544No Hit
CCCAACCAATAACACTATCTCTAACCTCGATTCCCTCATCTATCCTATAA3510.15700202179241737No Hit
CCCAAAAATTAATAAATAAACCCCACTCACCTACTTAATCTCCCTGTAGA3380.15118713209640192No Hit
CACCCAAAATACCTCAACTACCTTACTCTAAACTAACCCCGTTAACTCCC3190.14268844715607165No Hit
AATACCTTAACTCCCTAAAACCCAATATAAATCAAAAATATCCCAAAACT2910.1301640693492691No Hit
AATACCTTAACTCCCTAAAACCCAAGTATAAATCAAAAATATCCCAAAAC2730.12211268361632464No Hit
AAACTACAAAATCAAAACCAACCCAGAACCACACCAAACCCCCACAAAAC2660.11898158916462401No Hit
CCATAAAAACAAAAACCTAAAAAAAACTAAAACACCTATTAACCTATCCC2580.11540319550553757No Hit
AATACCTAAAAACCCAAAACCCTTCCTCCGTTTAAAAAAAAAAACAACAT2260.10108962086919182No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)