FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000888365

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888365
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3239
Sequences flagged as poor quality0
Sequence length151
%GC39

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCAAACAACCAAACTAAACAACCAAACTAAAATCTACTCTTCCCTCCCC59518.369867242976227No Hit
AATCTAAAAACCTCCTCTCCAAAACCTTATACAACCCCTCCTACCTGTAG41412.7817227539364No Hit
TAAAACTCACTACTATCCCCCACAAACTAAAACTAAAAAACAAACTCTAA2908.953380673047237No Hit
ATATAATACCCACCTTCCAAACCACGTCGTCATAAAACTAAACCCCACAT2407.409694350108058No Hit
AACTTCTCCTATCCCCTCCCTACCCCCATACCTCAAATTTCTCCCTCCAT832.562519296079037No Hit
ACCAAACAACCAAACTAAACAACCAAACAACCAAACCAAACAACCAAACC782.408150663785119No Hit
CCCAAACAACCAAACTAAACAACCAAACTAAAATCTACTCTTCCCTCCCC732.253782031491201No Hit
CTATTAACCCCCTCCCTAAACAATCACCGTTTATATTATTTATTTCCTAA511.5745600493979623No Hit
AAAATTTAATCCTCAATCCAATCCTAAACTGTAGAACCATGTCGTCAGTG491.5128125964803951No Hit
CATCTAAAAACCTCCTCTCCAAAACCTTATACAACCCCTCCTACCTGTAG280.86446434084594No Hit
CCAAAAAAACCAACAAAAAAACTAAATAAAACCGAAAACTTCTCCATCTT280.86446434084594No Hit
ACCAAACAACCAAACTAAACAACGCTAAAAACGAAAAACCCAAATATCCT220.6792219820932387No Hit
CTCCAAACTACAAAAAACTCCTTCAAATCACCTATCCACCTCCTAAAACA220.6792219820932387No Hit
CCAAAACTCAACAACCTAAACCCCGAAAATAACTACTAAACTACCTACCG210.6483482556344551No Hit
AACTTCTCCTATCCCCTCCCTACCCCCGTACCTCAAATTTCTCCCTCCAT210.6483482556344551No Hit
CCTAAAACAAACTAATACCACCCACTAAACGAAAACGAAACCCTAAAAAA210.6483482556344551No Hit
TCTCTTTACATTTAATCAAAAACCCAAAAAATTAAACAAAACGTCTAAAA200.6174745291756715No Hit
CAAAACTCACTACTATCCCCCACAAACTAAAACTAAAAAACAAACTCTAA180.5557270762581044No Hit
AATCTAAAAACCTCCTCTCCAAAACTAAATCTTACACACCCCCAAAATTA160.4939796233405372No Hit
AAAATTAACCTAAAAATCCCCACAACCTTAACTCTACCTATATTCCCACA160.4939796233405372No Hit
CTATAATACCCACCTTCCAAACCACGTCGTCATAAAACTAAACCCCACAT150.46310589688175363No Hit
TCCCTAATCTCAAAAAACATAAACTAACTCTAAAACCAAAAATTTCGATT150.46310589688175363No Hit
CCCAAAATCCTAAAATTCTCCTAACCACAAAAACTCCCCACAAAAACAAA150.46310589688175363No Hit
AAAATTTAATCCTCAATCCAATCCTAAACCACCAACATCCTCTATTAATC140.43223217042297No Hit
ACACTCTAAAATTTCCCCTAAAAAACTAATTCAAACCATAACGAAAAATA120.3704847175054029No Hit
ACAAACCAACCTAAATTAAAATCCCAACTCCTTAATAACCGTCCTAACCT120.3704847175054029No Hit
ATATAATACCCACCTTCCAAACCACGAACCCGCAACCCAATCCTAAAAAC110.33961099104661935No Hit
ATATAATACCCACCTTCCAAACCACAAACCCGCAACCCAATCCTAAAAAC100.30873726458783574No Hit
AACCTTTATTTAATCAAAACTACTTAATTCAAAAAATATCCACATTACTC100.30873726458783574No Hit
CCTAAAACAAACTAATACCACCCACTAAACGAAAACGAAACCCCGAAAAA100.30873726458783574No Hit
AACCTTTATTTAATCAAAACTACTTAATTCAAAAAATATCCACGTTACTC90.2778635381290522No Hit
ACAAACCAACCTAAATTAAAATCCCAACTGTAGAACCATGTCGTCAGTGT80.2469898116702686No Hit
ACAAAAATAAACTAAAATCCCAACTGTAGAACCATGTCGTCAGTGTAGAT80.2469898116702686No Hit
CACAAAACACCTAAATTATACCCAAAAAAACTAATCCCGCCGAATATCTA80.2469898116702686No Hit
GCCAAACAACCAAACTAAACAACCAAACTAAAATCTACTCTTCCCTCCCC70.216116085211485No Hit
ACCAAACAACCAAACTAAACAACCAAACCAAACAACCAAACTAAAATCTA70.216116085211485No Hit
AATCTAAAAACCTCCTCTCCTAAACCTTATACAACCCCTCCTACCTGTAG60.18524235875270145No Hit
ACCAAACAACCAAACTAAACAACCAAACTAAATCTACTCTTCCCTCCCCA60.18524235875270145No Hit
AACCCAATCTAAAACCAAAAACCTACGCATCCAATATAAAAAAAACAACT60.18524235875270145No Hit
TAAAACTCACTACTATCCCCACAAACTAAAACTAAAAAACAAACTCTAAA60.18524235875270145No Hit
ACCAAACAACCAAACTAAACAATCAAACTAAAATCTACTCTTCCCTCCCC60.18524235875270145No Hit
GATCTAAAAACCTCCTCTCCAAAACCTTATACAACCCCTCCTACCTGTAG60.18524235875270145No Hit
AATCTAAAAACCTCCCTTCTAATAACCTCAATGTAGAACCATGTCGTCAG60.18524235875270145No Hit
ACCAAACAACCAAACTAAACAACCAAACTAAAATCTACTCTTCCCTCCCA60.18524235875270145No Hit
CCAAACAACCAAACTAAACAACCAAACTAAAATCTACTCTTCCCTCCCCA60.18524235875270145No Hit
CACAAAACACCTAAATTATACCCAAAAAAACTAATCCCGCCAAATATCTA50.15436863229391787No Hit
TAAAACTCACTACTATCCCCCACAAACTAAAACTAAAAACAAACTCTAAA40.1234949058351343No Hit
TAAAACTCACTACTATCCCCCACAAACCAAAACTAAAAAACAAACTCTAA40.1234949058351343No Hit
AATCTAAAAATCTCCTCTCCAAAACCTTATACAACCCCTCCTACCTGTAG40.1234949058351343No Hit
TAAAACTCACTACTATCCCCCACAAACTAAAACTAAAAAACAAACTCTAG40.1234949058351343No Hit
ACCAAACAACTAAACTAAACAACCAAACTAAAATCTACTCTTCCCTCCCC40.1234949058351343No Hit
TAAAACTCACTACTATCCCCCACAAACTAAAACTAAAAAACAAGCTCTAA40.1234949058351343No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)