FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000888504

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888504
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences128444
Sequences flagged as poor quality0
Sequence length151
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAATTGTTTTTGGGAATTTGTAGCGTTGGTTTCGTTAAGTCGGTTGGAA81186.320264083958768No Hit
GGGGATTGGGATAAAGGAGTATTATTTTCGGTTTTTGTTTGAGTGATTTC78566.116284139391485No Hit
GGTAGGAGGGGTTGTATAAGGTTTATTTGGAAGTTAGAATTTATTTGTGG68975.369655258322694No Hit
AAAGATAATAAATTGGGTATTGTTGAAATGTAATTAATTAAATAGTTTTT64935.055121297997571No Hit
TGGGGAGGGAAGAGTAGATTTTACGATATTTTTGGGGTTTTTAGATAGTT59214.60979103733923No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTATT49623.8631621562704366No Hit
GTTGGGATTTTAGTTTATTTTTGTAATTTAAATATTTTTTAGTAAAGTTT47033.661517859923391No Hit
GGTTAGGAGAATTTTAGGATTTTGGGTTTTTTTTATAGTAGATTGGAGGA44213.441966927221202No Hit
TTGTGGGGATTTAGGTTGTATTATGCGGATGAGGTTTTTAGGTAGTAGGT43713.4030394568839335No Hit
GTTTGGAGGAGTTGGTTTTTTAGAGTTGGTGTTGTTGGTGTTGTATTTTG42393.3002709351935473No Hit
GTTTAGGATTGGATTGAGGATTAAATTTTTTAAGGTATTTTTTTAAAGAG42303.2932639905328394No Hit
GGGTGTTTAGGTATTAGGGAGTTGTATGGGGTAGTGTTCGGGCCGTGGCG39153.048020927408053No Hit
GGAAGTTAGGTTTTTAGGAGTGTGGTTGGGTGGGGAGTAGGAGAAGGGTT38823.0223287969854566No Hit
GGGAGGTAAGAGAGTGTGGATAGTATAGAAATAGTGTGGGGTTGTGGTGG34082.6532963781881596No Hit
GAGAGTAGTAGGAGGAGGAGGAGGAGGGGGTAAGTGAGAGGGGGTGTGGT32722.547413658870792No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTTGGTAGGGTTGAGTGTTAGGTT29932.330198374388839No Hit
TTGGTGGGGAGGTTTTGATAGGTTTTGGGTTTGGGTTTAGGACGGTGAGG29322.282706860577372No Hit
TAGATGTAATAGGTTTTTTTGGGGGGATTTTTAGGGAGTGGTTGGGTAGA25091.9533804615240884No Hit
GAAGTTGTGGAATTTAGGTAGGAAGTGGTTGATTTTTAGTGTTTAGTTGT20091.5641057581514122No Hit
GTTGTGGTTATTGGTTTTGTGTTGTTTTTTTTTTTGGGTGTAGGGGATAA17331.349226121889695No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGTGTTAGGTT12360.9622870667372552No Hit
GTTGTGGTTATTGGTTTTGTGTTGTTTTTTTTTTGGGTGTAGGGGATAAG11810.9194668493662609No Hit
GTTTATTGTTTGTTGTGTGTGTGGTACACTGACGACATGGTTCTACAGTT10390.8089128336084208No Hit
TGGGGAGGGAAGAGTAGATTTTAGTTTGGTTGTTTAGTTTGGTTGTTTGG10260.7987916913207311No Hit
TGGGGAGGGAAGAGTAGATTTTAGTTTGGTTGTTTAGTTTGGTTGTTTAG9420.7333935411541217No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTATTT6360.49515742269004387No Hit
GAGAGTAGTAGGAGGAGGAGGAGGGGGTAAGTGAGAGGGGGTGTGGTAGG5320.4141882843885273No Hit
TGGGGAGGGAAGAGTAGATTTTAGTTTAGTTTGGTTGTTTAGTTTGGTTG4050.3153125097318676No Hit
GTTGTGGTTATTGGTTTTGTGTTGTTTTTTTTTGGGTGTAGGGGATAAGA3940.3067484662576687No Hit
GTTGTGGTTATTGGTTTTGTGTTGTTTTTTTTTTTTGGGTGTAGGGGATA3820.29740587337672447No Hit
GGTTAGGAGAATTTTAGGATTTTGGGTTTTTTTATAGTAGATTGGAGGAG3340.2600355018529476No Hit
TGGGGAGGGAAGAGTAGATTTTAGTTGGTTGTTTGGTTGGTTGTTTAGTT3220.25069290897200336No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTTAT3210.24991435956525804No Hit
GAAGTTGTGGAATTTAGGTAGGAGTGGGGGTTGGGAGAGACCAAGTCTCT2780.2164367350752079No Hit
GTTTATTGTTTGTTGTAAAATATTAGAGGAAGGAGGGAGACCAAGTCTCT2330.18140201177166704No Hit
GGTAGGAGGGGTTGTATAAGGTTTTGGAGAGGAGGTTTTTAGATTAGACC2190.1705023200772321No Hit
GGTTAGGAGAATTTTAGGATTTTGGTTTTTTTTATAGTAGATTGGAGGAG1940.1510385849085983No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1390.10821836753760394No Hit
GGTTGGAGTTTTAGGTGTATTTGGGCGTAGGTTTTTTTGAGGAAATTAAG1290.10043287347015041No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)