FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000888508

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888508
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2872
Sequences flagged as poor quality0
Sequence length151
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGAGGGAAGAGTAGATTTTAGTTTGGTTGTTTAGTTTGGTTGTTTGG77126.845403899721447No Hit
TTGGTGGGGAGGTTTTGATACACTGACGACATGGTTCTACATTGGTGGGG1956.789693593314763No Hit
GGTTGGAGTTTTAGGTGTATTTGGGCGTAGGTTTTTTTGAGGAAATTAAG1605.571030640668524No Hit
GAAGTTGTGGAATTTAGGTAGGAGTGGGGGTTGGGAGAGACCAAGTCTCT1164.03899721448468No Hit
GGAAGTTAGGTTTTTAGGAGTGTAGGGAGGGGATAGGAGAAGTTAGACCA993.447075208913649No Hit
GGAAGTTAGGTTTTTAGGAGTGTGGGGAGGGGATAGGAGAAGTTAGACCA722.5069637883008355No Hit
TGGGGAGGGAAGAGTAGATTTTAGTTTGGTTGTTTGGTTTGGTTGTTTGG401.392757660167131No Hit
GGTAGTTGGGTGATTTTTTTATAGGAGTTTAGGTGGAGACCAAGTCTCTG341.1838440111420612No Hit
GGAAGTTAGGTTTTTAGGAGTGTGGTTGGGTGGGGAGTAGGAGAAGGGTT331.149025069637883No Hit
TGGGGAGGGAAGAGTAGATTTTAGTTTGGTTGTTTAGTTTGGTTGTTTAG270.9401114206128134No Hit
GTTTAGGATTGGATTGAGGATTAAATTTTAGACCAAGTCTCTGCTACCGT220.766016713091922No Hit
TTGGTGGGGAGGTTTTGATACACTGATGACATGGTTCTACATTGGTGGGG220.766016713091922No Hit
GTGTTTGGAGTGTTGTTTTTTTAGGTGAGATTAGGGATTTGAGACCAAGT170.5919220055710306No Hit
TAGAAAGGTGGGATAGTTTAAAGGGAGACCAAGTCTCTGCTACCGTACTC160.5571030640668524No Hit
GGAAGTTAGGTTTTTAGGAGTGTGGTCGGGTGGGGAGTAGGAGAAGGGTT150.5222841225626741No Hit
GGTAGGAGGGGTTGTATAAGGTTTTGGAGAGGAGGTTTTTAGATTAGACC120.4178272980501393No Hit
GTGTTTGGAGTGTTGTTTTTTTAGGGGAAATTTTAGAGTGTAGACCAAGT100.34818941504178275No Hit
TAGATGTAATAGGTTTTTTTGGGGGAAATTTTAGAGTGTAGACCAAGTCT80.2785515320334262No Hit
AAAATATTAGAGGAAGGAGGGGTTTCACTGACGACATGGTTCTACAAAAA80.2785515320334262No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGCGTTAGGTT80.2785515320334262No Hit
AATGGTTGTTAGAGTTGTAGGGTTTGTAGTAGACCAAGTCTCTGCTACCG70.24373259052924792No Hit
GGTTGGAGTTTTAGGTGTATTTGGGTGTAGGTTTTTTTGAGGAAATTAAG70.24373259052924792No Hit
TGGGGAGGGAAGAGTAGATTTTAGTTTGATTGTTTAGTTTGGTTGTTTGG70.24373259052924792No Hit
TTGGTGGGGAGGTTTTGATACACTGACGACATGGCTCTACATTGGTGGGG70.24373259052924792No Hit
GGTTAGGAGAATTTTAGGATTTTGGGAGACCAAGTCTCTGCTACCGTACT60.20891364902506965No Hit
GTTGGGATTTTAGTTTATTTTTGTAATTTAGACCAAGTCTCTGCTACCGT60.20891364902506965No Hit
AAAATATTAGAGGAAGGAGAGGTTGGGATGTAAGGAGATATAGACCAAGT60.20891364902506965No Hit
GAAGTTGTGGAATTTAGGTAGGAATGGGGGTTGGGAGAGACCAAGTCTCT60.20891364902506965No Hit
AAAATATTAGAGGAAGGAGGGGTTGGGATGTAAGGAGATATAGACCAAGT60.20891364902506965No Hit
GGAAGTTAGGTTTTTAGGAGTGTAGGGAGGGGATAGGAGAAGTGAGACCA60.20891364902506965No Hit
GTTGTGGTTATTGGTTTTGTGTGTGTGAGACCAAGTCTCTGCTACCGTAC50.17409470752089137No Hit
GTTTAGGATTGGATTGAGGATTAAATTTTTTAAGGTATTTTTTTAAAGAG50.17409470752089137No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTTGGTAGGGTTGAGCGTTAGGTT50.17409470752089137No Hit
TGGGGAGGGAAGAGTAGATTTTAGTCTGGTTGTTTAGTTTGGTTGTTTGG50.17409470752089137No Hit
TGGGAGGGAAGAGTAGATTTTAGTTTGGTTGTTTAGTTTGGTTGTTTGGT50.17409470752089137No Hit
TTGGTGGGGAGGTTTTGATACACTGACGACATGGTTCTACATTGGCGGGG50.17409470752089137No Hit
TGGGGAGGGAAGAGTAGATTTTAGTTTGGTTGTTTAGTTTGGCTGTTTGG50.17409470752089137No Hit
TTGGTGGGGGGTTTAGGTTGTTGAGTTTTGGAGACCAAGTCTCTGCTACC50.17409470752089137No Hit
GGTAGGAGGGGTTGTATAAGGTTTATTTGGAAGTTAGAATTTATTTGTGG50.17409470752089137No Hit
TGGGGAGGGAAGAGTAGATTTTACGATATTTTTGGGGTTTTTAGATAGTT40.1392757660167131No Hit
TAGATGTAATAGGTTTTTTTAGGGGAAATTTTAGAGTGTAGACCAAGTCT40.1392757660167131No Hit
TGTGTGTGTGAATTTAAAAGTGTGATAATAAATATTATTTTTATTAGTTG40.1392757660167131No Hit
GGAAGGTATGTGGGGTTTAGTTTTAGTAGACCAAGTCTCTGCTACCGTAC40.1392757660167131No Hit
TGGGGAGGGAAGAGTAGATTTTAGTTTGGTTGTTAGTTTGGTTGTTTGGT40.1392757660167131No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTTATT40.1392757660167131No Hit
GTTGGGATTTTAGTTTATTTTTGTAATTTAAATATTTTTTAGTAAAGTTT40.1392757660167131No Hit
GGTTGGAGTTTTAGGTGTATTTGGGCGCAGGTTTTTTTGAGGAAATTAAG40.1392757660167131No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTCGGTAGGGTTGAGTGTTAGGTT40.1392757660167131No Hit
TTGGTGGGGAGGTTTTGATATACTGACGACATGGTTCTACATTGGTGGGG40.1392757660167131No Hit
GGTTGGAGTTTTAGGTGTATTTGGCGTAGGTTTTTTTGAGGAAATTAAGG40.1392757660167131No Hit
GGGGATTGGGATAAAGGAGTATTATTTTCGGTTTTTGTTTGAGTGATTTC40.1392757660167131No Hit
TGGGGAGGGAAGAGTAGATTTTAGTTTGGTTGTTTAGTTTAGTTGTTTGG40.1392757660167131No Hit
TTGGTGGGGAGGTTTTGATACACTGACGACATGGTTATACATTGGTGGGG40.1392757660167131No Hit
TTGGTGGGGAGGTTTTGATACACTGACGACATGGTTCTACGTTGGTGGGG30.10445682451253482No Hit
GGAAGTTAGGTTTTTAGGAGTGTGGGGAGGGGATAGGAGAAGTGAGACCA30.10445682451253482No Hit
TGGGGAGGGGAGAGTAGATTTTAGTTTGGTTGTTTAGTTTGGTTGTTTGG30.10445682451253482No Hit
TGGGTTTTAGATATTTGTTTTTTTTGGTCGGTTTGTTTTTAATTTTTTAG30.10445682451253482No Hit
TGGGGAGGGAAGAGTAGATTTTAGTTTGGGTGTTTAGTTTGGTTGTTTGG30.10445682451253482No Hit
TGGGGAGGGAAGAGTAGATTTTAGCTTGGTTGTTTAGTTTGGTTGTTTGG30.10445682451253482No Hit
GTTTTATTGGGTTAATGAGAAGGGAGGTTGGTAGGGTTGAGTGTTAGGTT30.10445682451253482No Hit
TTGAGGTTATTAGAAGGGAGGTTTGAGAAGACCAAGTCTCTGCTACCGTA30.10445682451253482No Hit
TGGGGAGGGAAGAATAGATTTTAGTTTGGTTGTTTAGTTTGGTTGTTTGG30.10445682451253482No Hit
GGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAA30.10445682451253482No Hit
GTAAGGTTTGGGGTTATTTTAGTGGAGTCGGAGGTGTTACGTTTTGTTGT30.10445682451253482No Hit
TTGGTGGGGAGGTTTTGATACACTGACGACATGGTTCTATATTGGTGGGG30.10445682451253482No Hit
GGGAGATTAAGTAGGTGAGTGGTTCGTTTCGAGTTTGGTTTTTTTTATTT30.10445682451253482No Hit
TTGAGGTTATTAGAAGGGAGGTTTAGATTAGTTAGACCAAGTCTCTGCTA30.10445682451253482No Hit
TGGGGAGGGAAGAGTAGATTTTAGTTCGGTTGTTTAGTTTGGTTGTTTGG30.10445682451253482No Hit
AGTAACAGATACAAACTCATCACGAACGTCAGAAGCAGCCTTATGGCCGT30.10445682451253482No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)