FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000888509

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888509
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2872
Sequences flagged as poor quality0
Sequence length151
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCAAACAACCAAACTAAACAACCAAACTAAAATCTACTCTTCCCTCCCC64322.38857938718663No Hit
CCAAAACTCAACAACCTAAACCCCCCACCAATGTAGAACCATGTCGTCAG1806.267409470752089No Hit
TAAAACTCACTACTATCCCCCACAAACTAAAACTAAAAAACAAACTCTAA1314.561281337047354No Hit
CTCCCAACCCCCACTCCTACCTAAATTCCACAACTTCTGTAGAACCATGT1093.795264623955432No Hit
AACTTCTCCTATCCCCTCCCTACACTCCTAAAAACCTAACTTCCTGTAGA983.4122562674094707No Hit
AACTTCTCCTATCCCCTCCCCACACTCCTAAAAACCTAACTTCCTGTAGA722.5069637883008355No Hit
CCCAAACAACCAAACTAAACAACCAAACTAAAATCTACTCTTCCCTCCCC682.3676880222841223No Hit
CCACCTAAACTCCTATAAAAAAATCACCCAACTACCTGTAGAACCATGTC341.1838440111420612No Hit
ACCAAACAACCAAACTAAACAACCAAACAACCAAACCAAACAACCAAACT311.0793871866295264No Hit
AACTTCTCCTATCCCCTCCCTACCCCCATACCTCAAATTTCTCCCTCCAT301.0445682451253482No Hit
AAAATTTAATCCTCAATCCAATCCTAAACTGTAGAACCATGTCGTCAGTG230.8008356545961003No Hit
ACCAAACAACCAAACTAAACAACCAAACTAAACAACCAAACTAAACAACC220.766016713091922No Hit
CTATTAACCCCCTCCCTAAACAATCACCGTTTATATTATTTATTTCCTAA190.6615598885793872No Hit
CAAATCCCTAATCTCACCTAAAAAAACAACACTCCAAACACTGTAGAACC180.6267409470752089No Hit
CCCTTTAAACTATCCCACCTTTCTATGTAGAACCATGTCGTCAGTGTAGA160.5571030640668524No Hit
CAAAACTCACTACTATCCCCCACAAACTAAAACTAAAAAACAAACTCTAA140.48746518105849584No Hit
AACTTCTCCTATCCCCTCCCTACCCCCGTACCTCAAATTTCTCCCTCCAT120.4178272980501393No Hit
AATCTAAAAACCTCCTCTCCAAAACCTTATACAACCCCTCCTACCTGTAG100.34818941504178275No Hit
CCAAACAACCAAACTAAACAACCAAACTAAAATCTACTCTTCCCTCCCCA100.34818941504178275No Hit
GCCAAACAACCAAACTAAACAACCAAACTAAAATCTACTCTTCCCTCCCC90.31337047353760444No Hit
CCAAAACTCAACAACCTAAACCCCCCACCGATGTAGAACCATGTCGTCAG80.2785515320334262No Hit
ACACTCTAAAATTTCCCCCAAAAAAACCTATTACATCTATGTAGAACCAT80.2785515320334262No Hit
TAAAACTCACTACTATCCCCCACAAACTAGAACTAAAAAACAAACTCTAA80.2785515320334262No Hit
CTATTAACCCCCTCCCTAAACAATCACCATTTATATTATTTATTTCCTAA80.2785515320334262No Hit
ACACTCTAAAATTTCCCCTAAAAAAACAACACTCCAAACACTGTAGAACC80.2785515320334262No Hit
ACCAAACAACCAAACTAAACAATCAAACTAAAATCTACTCTTCCCTCCCC70.24373259052924792No Hit
AAATTACAAAAATAAACTAAAATCCCAACTGTAGAACCATGTCGTCAGTG70.24373259052924792No Hit
ATATCTCCTTACATCCCAACCTCTAATATTTTTGTAGAACCATGTCGTCA70.24373259052924792No Hit
ACTACAAACCCTACAACTCTAACAACCATTTGTAGAACCATGTCGTCAGT60.20891364902506965No Hit
CACTTCTCCTATCCCCTCCCTACACTCCTAAAAACCTAACTTCCTGTAGA60.20891364902506965No Hit
ATATCTCCTTACATCCCAACCTCTCCTTCCTCTAATATTTTTGTAGAACC60.20891364902506965No Hit
CCCAAACAACCAAACTAAACAACCAAACAACCAAACCAAACAACCAAACT60.20891364902506965No Hit
CTCCCAACCCCCATTCCTACCTAAATTCCACAACTTCTGTAGAACCATGT60.20891364902506965No Hit
CCAAAACTCAACAACCTAAACCCCCCACCAATGTAGAGCCATGTCGTCAG60.20891364902506965No Hit
ACCAAACAACTAAACTAAACAACCAAACTAAAATCTACTCTTCCCTCCCC60.20891364902506965No Hit
ATATCTCCTTACATCCCAACCCCTCCTTCCTCTAATATTTTTGTAGAACC50.17409470752089137No Hit
CCAAAAAAACCAACAAAAAAACTAAATAAAACCGAAAACTTCTCCATCTT50.17409470752089137No Hit
ACACTCTAAAATTTCCCCTAAAAAAACCTATTACATCTATGTAGAACCAT50.17409470752089137No Hit
CACACACACAAAACCAATAACCACAACTGTAGAACCATGTCGTCAGTGTA50.17409470752089137No Hit
CCCAAAATCCTAAAATTCTCCTAACCTGTAGAACCATGTCGTCAGTGTAG50.17409470752089137No Hit
ACCAAACAACCAAACTAAACAACCAAACTAAAATCTACTCTTCCCTCCCA50.17409470752089137No Hit
CCAAAACTCAACAACCTAAACCCCCACCAATGTAGAACCATGTCGTCAGT40.1392757660167131No Hit
ACTAAAACTAAACCCCACATACCTTCCTGTAGAACCATGTCGTCAGTGTA40.1392757660167131No Hit
ACCAAACAGCCAAACTAAACAACCAAACTAAAATCTACTCTTCCCTCCCC40.1392757660167131No Hit
ACCAAACAACCAAACTAAACAACCAAACTAAAATCTACTCTTCCCTCCTC40.1392757660167131No Hit
CACTTCTCCTATCCCCTCCCCACACTCCTAAAAACCTAACTTCCTGTAGA40.1392757660167131No Hit
AAAATTTAATCCTCAATCCAATCCTAAACCACCAACATCCTCTATTAATC40.1392757660167131No Hit
CTCCAAACTACAAAAAACTCCTTCAAATCACCTATCCACCTCCTAAAACA40.1392757660167131No Hit
ACCAAACAACCAAACTAAACAACCAGACTAAAATCTACTCTTCCCTCCCC40.1392757660167131No Hit
AATCTAAAAACCTCCTCTCCAAAACTAAATCTTACACACCCCCAAAATTA30.10445682451253482No Hit
ACAAACCAACCTAAATTAAAATCCCAACTGTAGAACCATGTCGTCAGTGT30.10445682451253482No Hit
ACCAAACAACCAAACTAAACAACCAAACTAAAATCTACTCTTCTCTCCCC30.10445682451253482No Hit
AAAATTAACCTAAAAATCCCCACAACCTTAACTCTACCTATATTCCCACA30.10445682451253482No Hit
ACCAAACAACCAAACTAAACAACGCTAAAAACGAAAAACCCAAATATCCT30.10445682451253482No Hit
ACAAAAATAAACTAAAATCCCAACTGTAGAACCATGTCGTCAGTGTAGAT30.10445682451253482No Hit
ACCAAACAACCAACTAAACAACCAAACTAAAATCTACTCTTCCCTCCCCA30.10445682451253482No Hit
CCCAAACAACCAAACTAAACAACCAAACTAAACAACCAAACTAAACAACC30.10445682451253482No Hit
AACCCAATCTAAAACCAAAAACCTACGCATCCAATATAAAAAAAACAACT30.10445682451253482No Hit
CACAAAACACCTAAATTATACCCAAAAAAACTAATCCCGCCGAATATCTA30.10445682451253482No Hit
TACCTTCCAAAAACTCTAAACATCCCCATACAACTACAAAACACCCAAAA30.10445682451253482No Hit
CCTAAAACAAACTAATACCACCCACTAAACGAAAACGAAACCCTAAAAAA30.10445682451253482No Hit
AACTAATCTAAACCTCCCTTCTAATAACCTCAATGTAGAACCATGTCGTC30.10445682451253482No Hit
AATCTAAAAACCTCCCTTCTAATAACCTCAATGTAGAACCATGTCGTCAG30.10445682451253482No Hit
TCTCAAACCTCCCTTCTAATAACCTCAATGTAGAACCATGTCGTCAGTGT30.10445682451253482No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)