FastQCFastQC Report
Sat 3 Sep 2022
EGAF00000888600

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000888600
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences178234
Sequences flagged as poor quality0
Sequence length301
%GC32

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGGGGAATAAGGTTTTGTATTTATTGAGTTTTTGTTATAGGTTTGGGT4633425.996162348373485No Hit
GTTGGTTTTTTTGGGGTGAAGCGGTTTTTATTTTCGTTGATGAACGGTTT2744415.397735561116285No Hit
TAGGTTGTTTTGGTTTAGAGAGGGTAGTTTTGGGGAGAGTTGTTACGTTC110166.180638935332204No Hit
GGGTTTAGGTTGTTGAGTTTTGGCGGGAAGGGCATCTTTTCTCGTTTATC96865.4344288968434755No Hit
AAGGGAAAAGGGAGTAGTAAAGTTGTTTTTGTTGAATTTTTTTTTTTCGT90315.06693447939226No Hit
GAAAGGGTTTTTTGAGAAGGTTATTTTGTTTGGAGTGGGGGCGTCGGGTA88904.987824994108868No Hit
AAGGGAAAAGGGAGTAGTAAAGTTGTTTTTGTTGAATTTTTTTTTTCGTT43322.4305126967918578No Hit
GATTGTTTAGGGAGGGGGTTAATAGCGTGTTAGTATTGAGGTTAGGTTTG28161.5799454649505706No Hit
AAGGGAAAAGGGAGTAGTAAAGTTGTTTTTGTTGAATTTTTTTTTTTTCG21211.1900086403267613No Hit
TGATTTTGTGAGTTTATAGGTTTAGGTTTTAGTAGTAGAATTATTTTGGT19891.1159486966572034No Hit
TAGGTTGTTTTGGTTTAGAGAGGGCGGGAGTTTTTGTAGGATAATATAGT10290.5773309245149635No Hit
GATAGGTTTGGAGATAGTTTTGTTTGGGTGGTTTTTTAGGGTTTGGTAGT9570.5369345916042955No Hit
AAGGGAAAAGGGAGTAGTAAAGTTGTTTTTGTTGAATTTTTTTTTCGTTT8230.4617525275761078No Hit
GTTTATGAGTAGGTTTTTTTGGGGAAGGTATGTGGGGTTTAGTTTTAAGA6530.3663722970925861No Hit
AGGTATTAGGGAGTTGTATGGGGTTGGTTTTGATTTTGTAGTTTAGACCA5280.296239774678232No Hit
GAGTATGTGGTTTTTTTATGTTGGGTTTTGGGTTTTTTTATGAAGGGTTT4240.2378895160294893No Hit
TTTTTTTTGGGTTTTTAGGGTAGAGTTCGGGTTGGGGAGGTTAGTGTTTC4180.23452315495360032No Hit
AAGGGAAAAGGGAGTAGTAAAGTTGTTTTTGTTGAATTTTTTTTTTTTTC3940.22105771065004431No Hit
GTTGGTTTTTTTGGGGTGAGGCGGTTTTTATTTTCGTTGATGAACGGTTT3910.21937453011209984No Hit
GTTGGTTTTTTTGGGGTGAAGCGGTTTTTATTTTTGTTGATGAACGGTTT3900.218813469932785No Hit
GATAGGTTTGGAGATAGTTTTGTTTTTTAGGGTTTGGTAGTGTGGTTTTT3870.21713028939484047No Hit
GTTGGTTTTTTGGGGTGAAGCGGTTTTTATTTTCGTTGATGAACGGTTTG3840.21544710885689597No Hit
AAGGGAAAAGGGAGTAGTAAAGTTGTTTTTGTTGAATTTTTTTTTTTTGT3610.20254272473265483No Hit
GGGTTTAGGTTGTTGAGTTTTGGCGGGAAGGGTATTTTTTTTCGTTTATC3240.18178349809800598No Hit
GGGTTTAGGTTGTTGAGTTTTGGCGGGAAGGGTATTTTTTTTCGTTTATT3010.16887911397376484No Hit
TTTTTAGGTGAGATTAGGGATTTGGGTATGATTGAGTTGGGTTTTTTGTT2910.1632685121806165No Hit
GGTTATTTTAGTTATTTTTGGTTAATTTAGACTGACGACATGGTTCTACA2830.1587800307460978No Hit
GGTGGGGAATAAGGTTTTGTATTTATTGAGTCTTTGTTATAGGTTTGGGT2620.1469977669804863No Hit
GGGTTTAGGTTGTTGAGTTTTGGGGGAAGGGCATCTTTTCTCGTTTATCG2490.1397039846493935No Hit
GGTGGGGAATAAGGTTTTGTATTTATTGGGTTTTTGTTATAGGTTTGGGT2480.13914292447007864No Hit
TAGGTTGTTTTGGTTTAGAGAGGGTAGTTTTGAGGAGAGTTGTTACGTTC2480.13914292447007864No Hit
TTAGGTAGATTTTGGAATTTGTGTTCACTGAGACATAGTTCTACATAGGT2440.13689868375281933No Hit
GAAAGGGTTTTTTGAGAAGGTTATTTTGTTTGAAGTGGGGGCGTCGGGTA2420.13577656339418964No Hit
GGTGGGGAATAAGGTTTGTATTTATTGAGTTTTTGTTATAGGTTTGGGTT2220.12455535980789298No Hit
GTTGGTTTTTTTGGGGTGAAGTGGTTTTTATTTTCGTTGATGAACGGTTT2180.12231111909063366No Hit
GTTGGTTTTTTTGGGGTGAAGCGGTTTTTATTTTCGTTGATGAATGGTTT2160.121188998732004No Hit
GTTGGTTTTTTTGGGGTGAAGCGGTTTTTATTTTCGTTGATGAACGGCTT2110.11838369783542983No Hit
GGTGGGGAATAAGGTTTTGTATTTATTGAGCTTTTGTTATAGGTTTGGGT1900.10660143406981833No Hit
GGTGGGAATAAGGTTTTGTATTTATTGAGTTTTTGTTATAGGTTTGGGTT1880.10547931371118865No Hit
AATTTGTTGTGGGTGATTATGGGAAGTTAGGTTTTTAGGAGTGTGGAGAC1820.10211295263529965No Hit
GTGAAGTTTTTGGTTTTTTGTTGTATAGATGAGGTTGGGATGTAAGGAGA1810.10155189245598484No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)