FastQCFastQC Report
Mon 13 May 2024
EGAF00000901058

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000901058
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences241679534
Total Bases24.1 Gbp
Sequences flagged as poor quality0
Sequence length100
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN12547710.5191879424924744No Hit
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3736270.15459604452895048No Hit
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2619690.10839519410857519No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)