FastQCFastQC Report
Wed 15 May 2024
EGAF00000901060

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000901060
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences240214401
Total Bases24 Gbp
Sequences flagged as poor quality0
Sequence length100
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN13714110.5709112335858665No Hit
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3530510.14697328658492878No Hit
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2480300.10325359302667286No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)