Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000901354 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 45571594 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AATGATACGGCGACCACCGAGAACTCCAGTCACCCAGTTCAATCTCGTAT | 299241 | 0.6566393091275236 | Illumina Single End PCR Primer 1 (96% over 25bp) |
AATGATACGGCGACCACCGAGAACTCCAGTCACCATACCAAATCTCGTAT | 167926 | 0.36848831752516714 | Illumina Single End PCR Primer 1 (96% over 25bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCAGTTCAATCTCGTAT | 116975 | 0.25668402119091993 | TruSeq Adapter, Index 5 (97% over 38bp) |
AATGATACGGCGACCACCCAGAACTCCAGTCACCCAGTTCAATCTCGTAT | 53872 | 0.11821399093479154 | Illumina Single End PCR Primer 1 (95% over 22bp) |