FastQCFastQC Report
Mon 5 Sep 2022
EGAF00000905855

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000905855
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28943881
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTGGATTAAGGCGACAGCGATTTCTAGGATAGTCAGTAGAATTAGAATT376600.13011385722598845No Hit
GTGGAAGTGAGCTACAACGTAGTACGTGTCGTGTAGTACGATGTCTAGTG304860.10532796206562624No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG301110.10403235143206953No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)