FastQCFastQC Report
Wed 15 May 2024
EGAF00000922577

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000922577
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47843483
Total Bases4.8 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph