FastQCFastQC Report
Tue 14 May 2024
EGAF00000922693

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000922693
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67885899
Total Bases6.8 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT782420.11525515777584384No Hit

[OK]Adapter Content

Adapter graph