Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000924213 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGCAGAATCTCGTAT | 19460 | 0.9730000000000001 | TruSeq Adapter, Index 5 (97% over 37bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGCAGAATCTCGTA | 4252 | 0.21259999999999998 | TruSeq Adapter, Index 5 (97% over 37bp) |
AATGATACGGCGACCACCGAGAACTCCAGTCACACAGCAGAATCTCGTAT | 2971 | 0.14855000000000002 | Illumina Single End PCR Primer 1 (96% over 25bp) |
TATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGCAGAATCTCGTAT | 2374 | 0.11869999999999999 | TruSeq Adapter, Index 5 (97% over 37bp) |