FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000924329

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000924329
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences433186
Sequences flagged as poor quality0
Sequence length100
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA74891.7288185675437342No Hit
GCCTGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTC15610.36035328934914795No Hit
GCCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTC13940.32180172027720194No Hit
ACTCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGG9560.22069041935796632No Hit
CCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTAC9390.2167660081350736No Hit
CTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATC9180.21191820603620615No Hit
CCCTAGGGTAACTTGTTCCGTTGGTCAAGTTATTGGATCAATTGAGTATA8700.20083751552450907No Hit
GCCGTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA7760.17913782993910235No Hit
ACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGG7500.17313578924526646No Hit
CACTCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACG7120.16436357592350628No Hit
CACCCGTTTACCTCTTAACGGTTTCACGCCCTCTTGAACTCTCTCTTCAA7110.1641327282045126No Hit
GCTCTGTTATCCCTAGGGTAACTTGTTCCGTTGGTCAAGTTATTGGATCA7050.16274764189055047No Hit
CACGCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACG6920.15974662154363253No Hit
TCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCG6430.14843508331294178No Hit
GTTTGGTAGTTTAGGACCTGTGGGTTTGTTAGGTACTGTTTGCATTAATA6270.14474151980904276No Hit
GGCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA5890.1359693064872826No Hit
GCGCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA5860.13527676333030153No Hit
CTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCGGTC5170.11934827071973701No Hit
GCATGTTTGGTAGTTTAGGACCTGTGGGTTTGTTAGGTACTGTTTGCATT5090.1175014889677875No Hit
GCGCTGTTATCCCTAGGGTAACTTGTTCCGTTGGTCAAGTTATTGGATCA5080.11727064124879383No Hit
ACCCGCTTTGGGCTGCATTCCCAAGCAACCCGACTCCGGGAAGACCCGGG5080.11727064124879383No Hit
CCTTTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCC5030.11611640265382538No Hit
GTTTGTTTGTTAGGTACTGTTTGCATTAATAAATTAAAGCTCCATAGGGT4350.10041875776225453No Hit
CTCCGAGGTCGCCCCAACCGAAATTTTTAATGCAGGTTTGGTAGTTTAGG4340.10018791004326086No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)