Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000927806 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCACTTCGAATCTCGTAT | 3915 | 0.19575 | TruSeq Adapter, Index 7 (97% over 35bp) |
AATGATACGGCGACCACCGAGAACTCCAGTCACAGTACAAGATCTCGTAT | 2981 | 0.14905000000000002 | Illumina Single End PCR Primer 1 (96% over 25bp) |
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA | 2500 | 0.125 | No Hit |
GCCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTC | 2439 | 0.12195 | No Hit |