Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000930649 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCAGTTCAATCTCGTAT | 4483 | 0.22415 | TruSeq Adapter, Index 5 (97% over 38bp) |
AATGATACGGCGACCACCGAGAACTCCAGTCACCCAGTTCAATCTCGTAT | 3222 | 0.1611 | Illumina Single End PCR Primer 1 (96% over 25bp) |
CCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT | 3120 | 0.156 | No Hit |
GCCCGGTTTCGGGTCTATTCCCAGCGACTAGACGCCCTATTAAGACTCGC | 3118 | 0.1559 | No Hit |
CCCCGTTACATCTTCCGCGCAGGCCGACTCGACTAGTGAGCTATTACGCT | 2528 | 0.12639999999999998 | No Hit |