Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000930819 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGAACTTAATCTCGTAT | 10920 | 0.5459999999999999 | TruSeq Adapter, Index 22 (97% over 38bp) |
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA | 3889 | 0.19445 | No Hit |
GCCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTC | 3308 | 0.16540000000000002 | No Hit |
GCCCGGTTTCGGGTCTATTCCCAGCGACTAGACGCCCTATTAAGACTCGC | 2614 | 0.1307 | No Hit |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGAACTTAATCTCGTA | 2535 | 0.12675 | TruSeq Adapter, Index 22 (97% over 38bp) |
CCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT | 2092 | 0.1046 | No Hit |