Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000931307 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCACTTCGAATCTCGTAT | 4132 | 0.2066 | TruSeq Adapter, Index 7 (97% over 35bp) |
AATGATACGGCGACCACCGAGAACTCCAGTCACAGTACAAGATCTCGTAT | 2968 | 0.1484 | Illumina Single End PCR Primer 1 (96% over 25bp) |
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA | 2464 | 0.1232 | No Hit |
GCCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTC | 2357 | 0.11785000000000001 | No Hit |