FastQCFastQC Report
Wed 6 Sep 2023
EGAF00000933347

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000933347
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41860452
Sequences flagged as poor quality0
Sequence length98
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN498590.11910764843150762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)