Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000934681 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGCTGATCATCTCGTA | 22357 | 1.11785 | TruSeq Adapter, Index 2 (97% over 38bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGCTGATCATCTCGTAT | 7139 | 0.35695000000000005 | TruSeq Adapter, Index 2 (97% over 38bp) |
AGAGCGGAAGAGCACACGTCTGAACTCCAGTCACCGCTGATCATCTCGTA | 2339 | 0.11695 | TruSeq Adapter, Index 2 (97% over 35bp) |
AATTATACGGCGACCACCGAGAACTCCAGTCACAAGGTACAATCTCGTAT | 2019 | 0.10095 | Illumina Single End PCR Primer 1 (95% over 22bp) |