Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000934992 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGCTGATCATCTCGTA | 25550 | 1.2775 | TruSeq Adapter, Index 2 (97% over 38bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGCTGATCATCTCGTAT | 8756 | 0.43779999999999997 | TruSeq Adapter, Index 2 (97% over 38bp) |
AATGATACGGCGACCACCGAGAACTCCAGTCACAAGGTACAATCTCGTAT | 2272 | 0.1136 | Illumina Single End PCR Primer 1 (96% over 25bp) |
AGGTCGGAAGAGCACACGTCTGAACTCCAGTCACCGCTGATCATCTCGTA | 2118 | 0.10590000000000001 | TruSeq Adapter, Index 2 (97% over 35bp) |