Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000935178 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GCCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTC | 3283 | 0.16415 | No Hit |
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA | 3275 | 0.16375 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTACAAGATCTCGTAT | 2670 | 0.1335 | TruSeq Adapter, Index 14 (97% over 38bp) |
AATGATACGGCGACCACCGAGAACTCCAGTCACAGTACAAGATCTCGTAT | 2545 | 0.12725 | Illumina Single End PCR Primer 1 (96% over 25bp) |
GTCCCCAGTGGCTTTTCCAGAACTACTGCCTTCACCATGAAGCTCCATGA | 2160 | 0.108 | No Hit |