FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000935520

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000935520
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences164
Sequences flagged as poor quality0
Sequence length247-250
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCTCACCTGTCACACGAGGTCCCCGAGCGCCGAGGAAGATGGTGGCGG42.4390243902439024No Hit
GCTTTACTGTCTTGCTTCCATTTTCCATGAACTGTGTTCAGATTTGTCCT42.4390243902439024No Hit
GCATCTTTATGTTTGTGTCCATTTTAACCTGGTCGAAGAACATTCCAACA31.8292682926829267No Hit
CAACTCCACTCCGGGACAGAATTATATCAAGAGGATGTCTGTGAATAGCC31.8292682926829267No Hit
TCCTCATCTCTGCTCCAAGCATCAGCCCACCCAGGGAAGGCAGGGGCTGC31.8292682926829267No Hit
CCGGCAAATCAACTAACTAACGCTCAGTGTGCAATTCCATATTTAACAGG21.2195121951219512No Hit
GGGTGTATCTGGTCTCTAGTTTCATTTCCAACCTAATTAGCCCATGATCA21.2195121951219512No Hit
GAGGCATCTCGGTGTGTTCTTGCCCGTGCTGATGTTTGACCCTTGAGCAG21.2195121951219512No Hit
CAGAGATCCTCCCACACTCCTTTCGACAGTCTTTGCCTCTTCCCTGTACC21.2195121951219512No Hit
TGGACTTTCCCATGGTCTCTGTGCAGTCCCCTGTGTCGAGTCCCTCAGGA21.2195121951219512No Hit
CACTCCCAGGCAGATGTTCCACTGCAGGCCCCGAGTGGGCGCTGTGCCCG21.2195121951219512No Hit
TCCCAGTGATCTTCTCGCTAAGAGTTTCCTGCCTGGGCAAGGAGGAAAGA21.2195121951219512No Hit
CACCTGGTCCACTCATCCTCAGGGTCCCATCCACCCTCAGAGGCCACTCC21.2195121951219512No Hit
AATGGAGAATATGCATCCTTAGAACTCAGCATTTAAAACATTTATACTAA21.2195121951219512No Hit
CCTGGATGTGCCACCTTTCGGGGCCAGGCCACAATGTGCAAGGTGCAGGC21.2195121951219512No Hit
CAGAGAGCTTCTTGGGCTTGCAGCATCTCTCCTGTCCTCCTTGTCAGGCT21.2195121951219512No Hit
GTGTTGCCACCTTCCTGACTCTCAGTATCCCGTCCGTCCTCAGGCCTGCT21.2195121951219512No Hit
CAATGGCCTGTTCCATCATAGCAGGGATAGTTCTTATAGTGTATAAAATC21.2195121951219512No Hit
GCGTCAAATGCAGCCTAGAAGAAGCGCCCTCAGGCAACTTCGTGGACATG21.2195121951219512No Hit
GGTGCTTGCTTTACTGCTCAGAGCTGTGAACATGAAGTACTTACTACTTT21.2195121951219512No Hit
CATGGAATTGACTTGGACCATAATAGATTTTTAATTTTACAGGTAAGTTT21.2195121951219512No Hit
CATTGCATGGTGGCCTCTTCTCAATACTACATCAGGCCTCAGAGGGCTTC21.2195121951219512No Hit
TCCTCTCAGCAGTCAGCATCATGGTGCTCTTCCCCAATCATTATAACCGA21.2195121951219512No Hit
ACACAATGCCACCTGTGCAGAGGGGGCAGACCTGTTAGATGTCTCCCAGG21.2195121951219512No Hit
GTGCTGGCGGCAAGACGAGCTCTCGGAGGATGCTGCGGCGCGGGGCGCGT21.2195121951219512No Hit
CCCTTCCAGTAGTCTGCTTCAGGGTCCTGAGTTCTCTTCCTGGCACGTTT21.2195121951219512No Hit
TCCCTGGGCTTCCACAGCAGCCCCTGCCTGCCTGGCGGGACCCCACGTCC21.2195121951219512No Hit
ACTCCAGCTTCGACCTGTCGCCCAATCAAACTGTCCTGTTACTGAACACT10.6097560975609756No Hit
TGATGGTGGCCTGCTATTTCCTTCAAATGAATGATTTTTACTAATTTTGT10.6097560975609756No Hit
GCGCAGCGAGGGATCAGAAGGTCTCGGACGCCGCGGCAGGGCCGGCCAGG10.6097560975609756No Hit
AGCTGAGAGCGTTGCACAAGAGGTGGTTCTTGTTGGCTGGCTGCCACTAA10.6097560975609756No Hit
GGGCCGCCGTCACAAACTCTGTAGCCCTGACCCGGGCCAGGCCAACAACA10.6097560975609756No Hit
GGGGCATCTCGGTGTGTTCTTGCCCGTGCTGATGTTTGACCCTTGAGCAG10.6097560975609756No Hit
GCTCCAGGGTTCGGAGACATCCTGGGCTGAAGGCGGCGGCGAACCGAAGA10.6097560975609756No Hit
GCTGGCACGGATGGTTATGCTGCAGTATGTAACTGAGGTGAGGGCCTCCC10.6097560975609756No Hit
ATACTTGTCGAGGCAACTTCTCTCTACTTTAGTTCAATGCAAGGTTAATG10.6097560975609756No Hit
CTGGGCTTAGCTGTGACTCCTTGCCCCATTCTCTGCGCCCCCAGTTTGTG10.6097560975609756No Hit
ATGCAACTAAATGCCTCCAACACACACACACAGTGTCATCATGTATGTTG10.6097560975609756No Hit
GCCTGAGGGACACCCAGAGCTTCGGCGGAGCGGAGCGCGGTGCACAGAGC10.6097560975609756No Hit
CCAGGGACTGGGAGAAGGAGTGAGGAGGCAGGGCCGGCATGCCTCTGCTG10.6097560975609756No Hit
CCCACCTAGCTGCTGCTGTGACCAGGAATGGTGAACACGATCGCTTGGGA10.6097560975609756No Hit
CAATGTCAAGCCTTTCAGCAGAAACTGGAACCTCATGGTGCAGCAGTTCA10.6097560975609756No Hit
AAGCCGCAGCAGAGATGGGAGTACAGGGAGGGGAGGTCCCAATGCCCGCT10.6097560975609756No Hit
TGATCCCGGTTCTCCAAACTCTTGCCTCAAAGGCGGCCTGCCCCGGTGCT10.6097560975609756No Hit
ATGCAACTAAATGCCTCCAACACACACACAGTGTCATCATGTATGTTGCA10.6097560975609756No Hit
TGATCAGCACCGCGGACAGCGGCGGCGCAGGCAGCGGGCCGGGGGCGGGG10.6097560975609756No Hit
CACAAACCAACTGTGTTTCAGCTCAGTAGGCACGGGAGGCAGTGCCCAGG10.6097560975609756No Hit
AGCTCCAACTCAACCAATGAATTGCCTGCCTGTCACAACGTGTTGGAGTA10.6097560975609756No Hit
TGAAATAGCCATTCCCTACTGAGGTCCCAGAACAGCCAACAGACCACAGG10.6097560975609756No Hit
TCTCCAGTGTCTTCTGACCTCACAGAAATGTTTTCATGCTTTTACCTAGC10.6097560975609756No Hit
GTAACGGCCTGGTTAGTGCTGCACTGGGGCCGCCATGCCCCCTCACCTCC10.6097560975609756No Hit
GCGTCAAATGCAACTAGAAGAAGCGCCCTCAGGCAACTTCGTGGACATGA10.6097560975609756No Hit
CCACCGGAGGTTTCTCACAGGTGGCAGAGCTCGGCCGCCGTCTTGTTCTG10.6097560975609756No Hit
CATCCCACTAATTGACCACTGAGTCTTACTTATTTTAGGCAAAACGAAAC10.6097560975609756No Hit
TGGGATACGCATGCACACAGTATACAGGAGAGCAGACCTCCCGACTTGCT10.6097560975609756No Hit
TTCATCCTCAGGCGGACTAGCTGGAAGGAAGGCAGACTCTGGTGAAGACG10.6097560975609756No Hit
CCACTCATCCTGATAAACACCACACAAGAGAACACAGGGCCCTACCTTGA10.6097560975609756No Hit
TTCTGCTGGAATCAAATGAGAGTCCAAGTGACCACAATTTTCTGTCTTTC10.6097560975609756No Hit
GGCTCTTCCCACCAATCCGGAGCGCCTCGGATGGGAATTGGATACATGTG10.6097560975609756No Hit
CTTGCGAAGCCAACGAGGTGCCCGGCGGGCAGGCGGCGGCGGGATGCGTG10.6097560975609756No Hit
TAAGGAAAGCATCCCTCTGCATGCAACTAAATGCCTCCAACACACACACA10.6097560975609756No Hit
TTTCTCCAACAACCCACAATATCAAGGCTTACTTGAGTGCATTAAAATAA10.6097560975609756No Hit
GGACCGGCGTCTCTGTGCGCGGGCCGGGACCGCGATCCTCGCGCTGGGGC10.6097560975609756No Hit
GTATTCTGATTGGGAAGGGATTTTTTTCAATTGTTTACATTCTACCTGAG10.6097560975609756No Hit
TTGAGGCTCTGGGCTCTGAATGCCCAGACCTTGTGCTGCCCTTGGGGGAG10.6097560975609756No Hit
GATCCACCCGACAACAGCAAAACAGATCATTTTACAATGACTAAATATCA10.6097560975609756No Hit
CTCTGAGCTGCCTTCTCTACATCGCAGTGGGGTCAGCTTCTACCGGGGCG10.6097560975609756No Hit
TGGAGATACGCATGAAGGTGTGTTCACACAGACGTAGGAAGCACACATTA10.6097560975609756No Hit
TTGAGAAGATGAGGTCCCTTTCGTGAGTCTGCACGGAGCCGCCGTACACC10.6097560975609756No Hit
TCGTGGAATTTGACTTATTGTTCAAAAACATTAGTTCAACTCTAAACAGT10.6097560975609756No Hit
TGCAGTTACAGAAGTTAGTAGGGAAAAGGATGATCTTCCTTCCCTATTCT10.6097560975609756No Hit
GTTCTTCGAGCTGACACCAAGCGATTGAAGCTGCTGGAAGAGGAGCGGCG10.6097560975609756No Hit
TCCCTGGGCTTACACAGCAGCCCCTGCCTGCCTGGCGGGACCCCACGTCA10.6097560975609756No Hit
GGCTTTCTGGATGTGTCCTGAGCCTTTGTCCTCGGCATCTCTGTGTGGTA10.6097560975609756No Hit
GCATCTTTATGTTTGTGTCCATTTTAACCTGGTCGAAGAACATTGCCACA10.6097560975609756No Hit
ATGGGCTTAGCTGTGACTCCTTGCCCCATTCTCTGCGCCCCCAGTTTGTG10.6097560975609756No Hit
CTGAGGTACGGGAATGGAAGGTCAATGCCAGTACGTGTGCTTTCTTTGCA10.6097560975609756No Hit
GCATTCAAATTGCTGTGCTTCCTCATATGGATGTGATACAAGATTAGAAA10.6097560975609756No Hit
CTGGTTCCCTGCCACCTACCCCACCCCCGACTCCAGGTCCCGGAAAATTT10.6097560975609756No Hit
CCTGGAGGAGGCCAACTTTGGAGAACAGGCATTGACATTGGGTCTGCGCT10.6097560975609756No Hit
TGGTGCTCAACTGTGATTCCTTTTCACCATTCACCCTGGATGTTCTCTTC10.6097560975609756No Hit
CAGCAGCCTAGTTGCTTGTTCTGTGGTGTTTCACCTGTCTTGAGGACAGC10.6097560975609756No Hit
TTCTCACAGCCATCCTGCTGTTGCTTTCAAATACTTCAGAGCTGTCCCAT10.6097560975609756No Hit
CTGTGCTCCCACACAGAGCCCTCCAAAGGGACCCGGCCCACAGGATGGAT10.6097560975609756No Hit
GACAAAGAATGCAAGTAAGGTGTGAAATGCTGCATTTTACAGCACCAATC10.6097560975609756No Hit
CAGGAATGGGACCATGAAAGTCAATTATATATGGAGATATACATGCAGGG10.6097560975609756No Hit
ATACTTGTCGAAGCAACTTCTCTCTACTTTAGTTCAATGCAAGGTTAATG10.6097560975609756No Hit
CACATCATAGGCATTTAAGCATTTGTCTGATGTACAATTAGAAAGCCCAG10.6097560975609756No Hit
GGGCCTTCCCTTCACAGGCCCCGCAGACACCAGCCCAGGACCCGGAGGCC10.6097560975609756No Hit
CTTGCGAAGCCAAAGAGGTGCCCGGCGGGCAGGCGGCGGCGGGATGCGTG10.6097560975609756No Hit
CTGGTTCCCTGCCACCTGCCCCACCCCCGACTCCAGGTCCCGGAAAATTT10.6097560975609756No Hit
AAGGGACTGTGTCGTCAAGGGTAGAGACGGGAAAAAACGAGAAGTCCTGA10.6097560975609756No Hit
CTTTGCGGAAGAGCCACTGTCCTGGTGTCAGTACGGCTGCTGCTTGGTAC10.6097560975609756No Hit
GAAGCGGTGATGGAGAGCCGAGCTCGCCCCTTCCAAGCGCTGCCCCGTGA10.6097560975609756No Hit
GGGTGGATCCTCTATTTCCTTACGTGGGCCACTGGATGGCTCCTCCGTGT10.6097560975609756No Hit
GGGTGAGTATGGGAGGGACTGGTGCACGCTGTCTTGTGAGTCTGAGATTT10.6097560975609756No Hit
TCCTCCTCACTCCCAAGGAGGTCTGGTGCTTACCTACTGTCATTGCTTTG10.6097560975609756No Hit
TCAGGAGTAAGCATTCTGAAGAGAGCTTGGACGTTGTTGGCAACTGGCGG10.6097560975609756No Hit
GACTTCCCAGGCCTCTGCAGGCAGCCTTGGAGTGGGTTCCTGCCCCCTCG10.6097560975609756No Hit
CTGCCTCTGGGAGGGAATGGAGTTCACCAGGTCCCAGCCTCCTTCCCTGT10.6097560975609756No Hit
TCTTCAGTATCAGATCCCACCTGCATGATTCCTGCACCTGCTGATGTCGG10.6097560975609756No Hit
GAAGCGGTGATGGAGAGCCGAGCGCGCCCCTTCCAAGCGCTGCCCCATGA10.6097560975609756No Hit
CCAAATGCATCACCTAAGTCGTGTGAAATCATGTGGTAGCTCATGGCTGT10.6097560975609756No Hit
GCTCCAGGGTTCGGAGACATCCTGGGCTGAAGGCGGCGGCGAACGGAAGA10.6097560975609756No Hit
CACCAGCAAGCAAGGTCAGAGGTCGTTAGAGGCTCAGAAAAGGGGCTTTC10.6097560975609756No Hit
CGCTGACTGTGGAGGTAGGTTGGGAGCGAAGTGGTGAGTCTGTAACCAGA10.6097560975609756No Hit
TGCAGTTACAGAAGTTAGTAGGGAAAAGCATGATCTTCCTTCCCTATTCT10.6097560975609756No Hit
CCCAACCTACCTGCTCCTGGGACCCTGTCCCCACACCTGCTGCTGTGACC10.6097560975609756No Hit
CCAGTGCTCATGTTAGTTTCCTTTTAGAGTCTAAGTAGAATGTTAAGCAG10.6097560975609756No Hit
GACTTCCCAGGCCTCTGCAGAAAGGGATGCAAGCCCTTCAGCACCTGCCT10.6097560975609756No Hit
GGGCTGGATGCAGAAGAGAACTCCAGCTGGTCCTTAGGGACACGGCGGCG10.6097560975609756No Hit
GACATCCATGTTGAGTGGACAAGTTAACCCTTGCCTAACTGAATTATTTT10.6097560975609756No Hit
CGCCGAGGCGAATCCTCACATTGCGGCGTGGTGGCCGACAAAACCCGGGA10.6097560975609756No Hit
GCAGAAGCCTGCAGAAGCCGAGCTGAAGCACAGTGCCAGGGAGTACTGGG10.6097560975609756No Hit
ACTCCAGCTTCGGCCTGTCGCCCAATCAAACTGTCCTGTTACTGAACACT10.6097560975609756No Hit
TTGGGCTAGTGTAGGTGTAGGTTTTTCATTCTTCAACCAACGGTGGTGAA10.6097560975609756No Hit
TGGACCTTCCCATGGTCTCTGTGCAGTCCCCTGTGTCGAGTCCCTCAGGA10.6097560975609756No Hit
GTCGCCACGGTAGTCCTGGCTGGTCTGCTGGCCAGCACCTGCCTCTCCTT10.6097560975609756No Hit
GAGACCCAAGCAGCTCAGTAAAGTATGTCTGGGGGTCAGGGGCACCCCAT10.6097560975609756No Hit
GTGGTGGGAAGGAGGTGTCTTGCCGCGTGGTTCACAGCCCAGGAGGACCC10.6097560975609756No Hit
AAGATGCTGACGAATTGGAAAACTTAAAGAACAATAGTACTATTTTGAAC10.6097560975609756No Hit
CTCCCTGCTATGCCTCACTGACCCATTAGGCATCGTGTCCTGTTGCATCT10.6097560975609756No Hit
GTGCCTGCGTGGCGATCAGGCCGGCCCCCGGGCTGGTGCTGAGAGGCCGC10.6097560975609756No Hit
CCCACCTACCTGCTCCTGTGACCAGGAATGGAGAACAGTGACGATCGCTT10.6097560975609756No Hit
CCTGTCTCTGTGTCTTCTCACCTTTGATGTCCCATCCGTCCTCAGGACTG10.6097560975609756No Hit
GCTTCCCGGTTCTCACTTCTGGCTGTTCTCTGTCCTCTCTCCACCTCCGG10.6097560975609756No Hit
GACAAAGAATGCTAGTAAGGTGTGAAATGCTGCATTTTACAGCACCAATC10.6097560975609756No Hit
GAGAGGGAGGTGCCACTGTCCTGCCTCCTTTTGAGCCCCCTTGCTCAGTG10.6097560975609756No Hit
TCTCTCTCCTCCTCTTGTATCCTCTGGTGCTGGTCAGTCCTCGCGGCTCT10.6097560975609756No Hit
GAAATGTCACTCCCATCCCTTAAAGGTTGGTATATGGTCCTGGTACAGTC10.6097560975609756No Hit

[OK]Adapter Content

Adapter graph