Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000936459 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCAGTTCAATCTCGTAT | 4255 | 0.21275 | TruSeq Adapter, Index 5 (97% over 38bp) |
GCCCGGTTTCGGGTCTATTCCCAGCGACTAGACGCCCTATTAAGACTCGC | 3202 | 0.1601 | No Hit |
CCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT | 3180 | 0.159 | No Hit |
CCCCGTTACATCTTCCGCGCAGGCCGACTCGACTAGTGAGCTATTACGCT | 2536 | 0.1268 | No Hit |
AATGATACGGCGACCACCGAGAACTCCAGTCACCCAGTTCAATCTCGTAT | 2158 | 0.10790000000000001 | Illumina Single End PCR Primer 1 (96% over 25bp) |