Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000937346 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGCAGAATCTCGTAT | 33951 | 1.6975500000000001 | TruSeq Adapter, Index 5 (97% over 37bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGCAGAATCTCGTA | 6784 | 0.3392 | TruSeq Adapter, Index 5 (97% over 37bp) |
AATGATACGGCGACCACCGAGAACTCCAGTCACACAGCAGAATCTCGTAT | 4857 | 0.24285 | Illumina Single End PCR Primer 1 (96% over 25bp) |
AATGATACGGCGACCACCCAGAACTCCAGTCACACAGCAGAATCTCGTAT | 2638 | 0.13190000000000002 | Illumina Single End PCR Primer 1 (95% over 22bp) |