Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000937585 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGCAGAATCTCGTAT | 6934 | 0.3467 | TruSeq Adapter, Index 5 (97% over 37bp) |
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA | 6910 | 0.34550000000000003 | No Hit |
GCCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTC | 2858 | 0.1429 | No Hit |
AATGATACGGCGACCACCGAGAACTCCAGTCACACAGCAGAATCTCGTAT | 2232 | 0.1116 | Illumina Single End PCR Primer 1 (96% over 25bp) |
AATTATACGGCGACCACCGAGAACTCCAGTCACACAGCAGAATCTCGTAT | 2159 | 0.10794999999999999 | Illumina Single End PCR Primer 1 (95% over 22bp) |