Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000937926 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA | 5735 | 0.28675 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGCAGAATCTCGTAT | 5678 | 0.2839 | TruSeq Adapter, Index 5 (97% over 37bp) |
AATTATACGGCGACCACCGAGAACTCCAGTCACACAGCAGAATCTCGTAT | 2797 | 0.13985 | Illumina Single End PCR Primer 1 (95% over 22bp) |
GCCTGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTC | 2129 | 0.10644999999999999 | No Hit |