Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000937932 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGCAGAATCTCGTAT | 6317 | 0.31584999999999996 | TruSeq Adapter, Index 5 (97% over 37bp) |
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA | 5688 | 0.28440000000000004 | No Hit |
AATTATACGGCGACCACCGAGAACTCCAGTCACACAGCAGAATCTCGTAT | 2961 | 0.14805000000000001 | Illumina Single End PCR Primer 1 (95% over 22bp) |
GCCTGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTC | 2141 | 0.10705 | No Hit |