FastQCFastQC Report
Tue 7 Mar 2023
EGAF00000966818

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000966818
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences41781046
Sequences flagged as poor quality0
Sequence length152
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN568150.13598271330976253No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)