FastQCFastQC Report
Thu 5 Jan 2023
EGAF00000966824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000966824
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences41303407
Sequences flagged as poor quality0
Sequence length152
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN754930.18277668958398519No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)