FastQCFastQC Report
Fri 24 Mar 2023
EGAF00000966892

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000966892
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49053499
Sequences flagged as poor quality0
Sequence length101
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTAACAGCAATACCTGATCACTACTTCGCACTAGTTTCTCGGTACTAT1896080.38653307891451333No Hit
ATCCCCGAGTCCTTCAATGCTATCATTCCCTTTGATATTGGACCATATGC1357720.2767835175223688No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)