FastQCFastQC Report
Mon 13 May 2024
EGAF00001010776

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001010776
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93206530
Total Bases6.9 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2062380.22126990458715715No Hit
GAAGAAAGTTAGATTTACGCCGATGAATATGATAGTGAAATGGATTTTGG960470.10304750107100866No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)