FastQCFastQC Report
Sat 25 May 2024
EGAF00001010820

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001010820
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences134180182
Total Bases10 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA25950141.9339771055013177No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2062130.1536836490503493No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1409550.10504904517121612No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)