FastQCFastQC Report
Tue 14 May 2024
EGAF00001010826

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001010826
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108842737
Total Bases8.1 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2400310.22053010298702796No Hit
CTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGT2057000.18898826478426392No Hit
GCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTAC1447980.13303414080812762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)