FastQCFastQC Report
Mon 13 May 2024
EGAF00001010829

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001010829
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104747143
Total Bases7.8 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT21117662.016060714897016No Hit
GGTTCTTCGAATGTGTGGTAGGGTGGGGGGCATCCATATAGTCACTCCAG1314350.12547836268909024No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)