FastQCFastQC Report
Tue 5 Sep 2023
EGAF00001010832

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001010832
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73522765
Sequences flagged as poor quality0
Sequence length75
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3551280.48301774287188465No Hit
CTGCTCTGCACTCTCAGGTATTCCCTGCTCTTACTCCAAAAAGATGGACCCAGGTCCGAAGGGGCACTGCCACTG757590.1030415545443646No Hit
CTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAACTG744170.10121626954590188No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)