FastQCFastQC Report
Mon 13 May 2024
EGAF00001010834

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001010834
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108021361
Total Bases8.1 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3443390.31876935896040043No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC1138910.1054337761954323No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)