FastQCFastQC Report
Wed 15 May 2024
EGAF00001109900

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001109900
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences214924260
Total Bases26.8 Gbp
Sequences flagged as poor quality0
Sequence length125
%GC20

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2538700.11812068121113922No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)