FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001132168

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132168
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences325165
Sequences flagged as poor quality0
Sequence length300
%GC64

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTACTACA22556669.36970461150493No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTACTACC56761.745575323297403No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGCACTACTACA14580.4483877416081066No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTACTCCA12500.384420217428075No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGCTGGTACTACTACA9830.30230805898543817No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTAATACA7200.22142604523857118No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGCACTACTACC6920.21281503236818233No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTACTAAA6840.21035474297664264No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTCCTACA6230.19159503636615255No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCACGATGGTACTACTACA6180.1900573554964403No Hit
ACAGGTCTGCCGCCTTGCAATGCGACGCCTGCCTGGGAGCGCAGGTGAGG5180.15930373810219428No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGACGGTACTACTACA5170.1589962019282518No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCCTGATGGTACTACTACA5140.15807359340642443No Hit
AGGGTTCCCTGGCCCCAGGGGTCGATCCACCCCATGATGGTACTACTACA5060.15561330401488474No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGTTACTACTACA4880.15007765288392047No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTTCTACA4750.1460796826226685No Hit
AGGGTTCCCTGGCCCCAGGGGTCGCACCACCCCATGATGGTACTACTACA4280.13162548244737288No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTACTATA4240.13039533775160303No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTACTACT4220.12978026540371812No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTACCACA4100.12608983131640858No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATGATGGTACTATTACA3770.1159411375763074No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGTACTAC3370.10363969061860902No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCCATAATGGTACTACTACA3360.10333215444466655No Hit
AGGGTTCCCTGGCCCCAGGGGTCGACCCACCCCATGATGGTACTACTACA3290.10117940122706932No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)