FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132202

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132202
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1210
Sequences flagged as poor quality0
Sequence length208
%GC54

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGTACTAC40933.80165289256198No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGACCAG1048.59504132231405No Hit
ACAGGAGACTGTGACAGTGACGGTGACCACAGACAGGCCACCCAGGGCTC131.0743801652892562No Hit
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTTG60.49586776859504134No Hit
CACACCAAGCTCAGAGAGGGCAGGGGTGGGAAGGAGACATCAGATGTGGG50.4132231404958678No Hit
ATTGTAGAAAGAGTTTGGGAGATTGAGGGGTGTAGAGTGGGGTTGGATTA50.4132231404958678No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGACCCG50.4132231404958678No Hit
ACAGACAGGCCACCCAGGGCTCGGGCTGGGTATGGTGGGCTCTGGTGGGA50.4132231404958678No Hit
GTTAAAATTTTGGGTTAAGGAGATCGATGCGTTGTCGTTTGTATTAAGAG40.3305785123966942No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGAACTAC40.3305785123966942No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTTGGTGGATTGTGGGTGT40.3305785123966942No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGGACTAC40.3305785123966942No Hit
CCATCATAGCCCTGCTGACCCTGTGACCTTGTGGCAGCCCCTCTGGCCCC30.24793388429752067No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGGCCAG30.24793388429752067No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGCACTAC30.24793388429752067No Hit
GTTAAAATTTTGGGTTAAGGAGATCGACGCGTTGTCGTTTGTATTAAGAG20.1652892561983471No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGTACTAA20.1652892561983471No Hit
ATTGTAGAAAGAGTTTGGGAGGTTAAGGTTGTAGTGAGATTTGATTGAGT20.1652892561983471No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGCGATAGCAGCTGGTACTAC20.1652892561983471No Hit
TTTTTATTTTTATAAATAGTAAGGATTGCGTTTTTTTGTATGGTGTTTTG20.1652892561983471No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGAAGATGGTACTAC20.1652892561983471No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGCTAGCAGCTGGTACTAC20.1652892561983471No Hit
GTTAAAATTTTGGGTTAAGGAGATCGATGTGTTGTTGTTTGTATTAAGAG20.1652892561983471No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATATCC20.1652892561983471No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGACCAC20.1652892561983471No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGACATAGCAGCTGGTACTAC20.1652892561983471No Hit
ATTGTAGAAAGAGTTTGGGAGAGAGTATTAAAAGGGGGTTTTTTTTTATA20.1652892561983471No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)