FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132204

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132204
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49
Sequences flagged as poor quality0
Sequence length208
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTTG48.16326530612245No Hit
GTTTGTAATTTTAGTTTTTCGGGAGGTTGAGGTCGGCGGATCGTGGGTGT24.081632653061225No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTTGGTGGATTGTGGGTGT24.081632653061225No Hit
GTTAAAATTTTGGGTTAAGGAGATCGACGCGTTGTCGTTTGTATTAAGAG24.081632653061225No Hit
GGTTTTTGAGGAATTGGATTTCGAGTTTGTTCGTAAGGCGAGACGTTTCG12.0408163265306123No Hit
AGGGTTCCCTGGCCCCAGTAGTCATCTGCGCTGCCCTCTTTCGCACAGTA12.0408163265306123No Hit
ATTGTAGAAAGAGTTTGGGAGATAGAGTAAGATTTCGTTTTAAAATAAGT12.0408163265306123No Hit
TAGACAAATTAGAGCCAATACCATCAGCTTTACCGTCTTTCCAGAAATTG12.0408163265306123No Hit
ATTGTAGAAAGAGTTTGAGTAGAGGAGTGATATGATTTGATTTTTTTTTT12.0408163265306123No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCCGAAAGAATAACCACTACT12.0408163265306123No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTATTCGACCTGTCGGCCGTT12.0408163265306123No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTCCTCGGTCGCTCCCACCCT12.0408163265306123No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAAGGTAC12.0408163265306123No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGTGTAGTAGTAGTTGCCAGCTGC12.0408163265306123No Hit
TTTTTATTTTTATAAATAGTAAGGATTGTGTTTTTTTGTATGGTGTTTTG12.0408163265306123No Hit
ATTGTAGAAAGAGTTTGGGAGATTGAGGGGTGTAGAGTGGGGTTGGATTA12.0408163265306123No Hit
AGGGTTCCCTGGCCCCAGTAGTTAGCCACTGCTGGGGTGTCTTTCGCACA12.0408163265306123No Hit
ATTGTAGAAAGAGTTTGGGAGATAGAGTAAGATTTTATTTTGAAAAGGAA12.0408163265306123No Hit
AGGGTGCCCTGGCCCCAGTAGTCACGACCCTCCACTTATCCACCCATGAC12.0408163265306123No Hit
GTTTGTAATTTTAGTTTTTCGGGAGGTTGAGGTTGGAGAATTGTTTGAAT12.0408163265306123No Hit
ACAGACAGGCCACCCAGGGCTCGGGCTGGGTATGGTGGGCTCTGGTGGGA12.0408163265306123No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAATGCGCCCAACGTAGTAGCTCCAAC12.0408163265306123No Hit
GTTTGTAATTTTAGTTTTTCGGGAGGTTGAGGTCGGCGGATTGTGGGTGT12.0408163265306123No Hit
ATTGTAGAAAGAGTTTGGGAGATAGAGTGAGGTTTTGTTTTAAAAAAATA12.0408163265306123No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGGACCCAGC12.0408163265306123No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAAACGTAGTCACCGTAGGGGGCGGC12.0408163265306123No Hit
GTTTGTAATTTTAGTTTTTTGGGAGATTGAGATAGGTGGATTTTTTGAGG12.0408163265306123No Hit
AGGGTTCCCTGGCCCCAGTAGTCGAACGGGACCCTTGTAGCACCACCTCT12.0408163265306123No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTAGGAGGATCGTTTGAAT12.0408163265306123No Hit
GTTAAAATTTTGGGTTATTTTTTGAATTTTTATTTTGATCGGAAGAGCGG12.0408163265306123No Hit
ATTGTAGAAAGAGTTTGGGAGGAGGATTTAAAGTTTTTGAGTTGTTTTTT12.0408163265306123No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTCTGATTATAACCACTCCA12.0408163265306123No Hit
GTTAAAATTTTGGGTTAAGGAGATTGACGTGTTGTTGTTTGTATTAAGAG12.0408163265306123No Hit
AGGGTTCCCTGGCCCCAGGGACTTAAGTTACCCCACGCGGATTGTCTCAC12.0408163265306123No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGAGCGTATAGCTATCAGAGCAATT12.0408163265306123No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCATAGGAAGCCGATGCCACTACT12.0408163265306123No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTGGGCATACCAAGTGTTGGT12.0408163265306123No Hit
ATTGTAGAAAGAGTTTGGGAGATCGAGGTTGTGGTGAATTTTGATTTTGT12.0408163265306123No Hit
GTGGTCCCTTGGCCCCAGACGTCCAGACCGTAGTAGTTGTAGTATAGGGT12.0408163265306123No Hit
AGGGTTCCCTGGCCCCAGTTCTCGAATAGACCCCATACCGACTGCTGCAC12.0408163265306123No Hit
ATTGTAGAAAGAGTTTGGGAGGTGGAGGTTATAGTGAGGTGAGATTATAT12.0408163265306123No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAACTCTCCAGGTATCAGCCACTGTGA12.0408163265306123No Hit
GTGGTCCCTTGGCCCCAGACGTCCATAGCGTCCATACCAACAGCTGCTAG12.0408163265306123No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)