FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132205

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132205
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences196
Sequences flagged as poor quality0
Sequence length208
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTTG2512.755102040816327No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTTGGTGGATTGTGGGTGT2412.244897959183673No Hit
TTTTTATTTTTATAAATAGTAAGGATTGTGTTTTTTTGTATGGTGTTTTG105.1020408163265305No Hit
ATTGTAGAAAGAGTTTGGGAGATTGAGGGGTGTAGAGTGGGGTTGGATTA84.081632653061225No Hit
GTTAAAATTTTGGGTTAAGGAGATCGACGCGTTGTCGTTTGTATTAAGAG52.5510204081632653No Hit
ATTGTAGAAAGAGTTTGGGAGGTTAAGGTTGTAGTGAGATTTGATTGAGT42.0408163265306123No Hit
GTTAAAATTTTGGGTTAAGGAGATTGATGCGTTGTCGTTTGTATTAAGAG31.530612244897959No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTGCCCGAGGGT31.530612244897959No Hit
GTTAAAATTTTGGGTTAAGGAGATCGACGCGTTGTTGTTTGTATTAAGAG21.0204081632653061No Hit
GTTAAAATTTTGGGTTAAGGAGATCGACGTGTTGTCGTTTGTATTAAGAG21.0204081632653061No Hit
GTTAAAATTTTGGGTTAAGGAGATTGATGTGTTGTTGTTTGTATTAAGAG21.0204081632653061No Hit
GTTAAAATTTTGGGTTAAGGAGATCGATGCGTTGTCGTTTGTATTAAGAG21.0204081632653061No Hit
GTTTGTAATTTTAGTTTTTTAGGAGGTTGAGGTAGGAGGATTGTTTGAGT21.0204081632653061No Hit
TTTTTATTTTTATAAATAGTAAGGATTGTGTTTTTTCGTATGGTGTTTTG21.0204081632653061No Hit
GTTAAAATTTTGGGTTATTTTTTGAATTTTTATTTTGATCGGAAGAGCGG21.0204081632653061No Hit
AGGGTTCCCTGGCCCCAGTAGTCCAAACGGTAGGATTCACTAACGGAAAG10.5102040816326531No Hit
TCCCCAGTCAGGGTGAGTAGTGGTGGGGAGCCGGGCAGGGGCCCAGCCCT10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGGCGGAGGTTGTAGTGAGTCGAGATTACGT10.5102040816326531No Hit
TTTTTATTTTTATAAATAGTAAGGATTAAGCGGAATAAATAGTAAGGGAG10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAGTAGTTTGTTTACTCCCCAAACCCCC10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGGGGTCCACGTCCCCCACTGATC10.5102040816326531No Hit
GTTAAAATTTTGGGTTAAGCGAAAGAAGTTAGATATAAAGATAATTGTAT10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGAACGCTAGTAGCTCCCACCC10.5102040816326531No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGAGTGGGGATGACGG10.5102040816326531No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCAGGTTGTAGCCACCGCGG10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGGTTGAGGTCGTAGTGAGTTATGATTATGT10.5102040816326531No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTCGAGGTCGGCGGATTGTGGGTGT10.5102040816326531No Hit
GTTAAAATTTTGGGTTAAGGAGATAGTAAGGTTAGTTTAGGAATTATAGA10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGGGAGCGGGTGAGCAGCT10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGATTTTGTAGTTATTAGAATTTTATTGTAGTAT10.5102040816326531No Hit
GGTTTTTGAGGAAGTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTTG10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAATAAAATAAACACTACTAGCATATTG10.5102040816326531No Hit
GTTTGTAATTTTAGTTTTAGGGGAAGAAATAGTAATTTATTTTAATAGTA10.5102040816326531No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCCGTAGCAGCTGGTACTAC10.5102040816326531No Hit
GTTAAAATTTTGGGTTAAGGAGATTGACGCGTTGTCGTTTGTATTAAGAG10.5102040816326531No Hit
GTGGTCCCTTTGCCCCAGACGTCCATATAGTAGCGCCAGTTGACCCCGCG10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTTATGCCACTCCAAAAATCG10.5102040816326531No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTCGAGGCGGGTGGGTTATTTGAGG10.5102040816326531No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGCAGTGTTAATG10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGTGTGTGAGGGTTTTAGGGATTGGTGTGGTGGGG10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCACCCGGTGGATCTCTCGCACAGTAATA10.5102040816326531No Hit
GTTAAAACTTTGGGTTAAGGAGATTGATGTGTTGTTGTTTGTATTAAGAG10.5102040816326531No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTTGGGAAGGTC10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCATACGGAGCCGGATTGTAGTTCCAGTT10.5102040816326531No Hit
GTTTGTAATTTTAGTTTTTTGGAAGGTCGAGGCGGGGTGCTTATTTTAGG10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAAGGTTGACCAGCCACTGCGCCATC10.5102040816326531No Hit
GTTTGTAATTTTAGTTTTTTAGGAGGTTGAGGTAGGAGAATTGTTTGAAT10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGGTAAAGGTTGTAGTGAGTCGTGGTCGCGT10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGAGATTGGGCGACTAGTGGTTCGC10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTAATAACCACTACTATCATA10.5102040816326531No Hit
ATTGTAGCAAGAGTTTGGGAGAAGAGAGGGTTTTTTTTGAAAGTGATTGG10.5102040816326531No Hit
GGTTTTTGAGGAATTGGATTTTGAGTTTGTTTGTAAGGGGAGATGTTTTG10.5102040816326531No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTCGAGGTGGGTAGATTATAAGGTC10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTTGCGATTATAATAACTCACCGA10.5102040816326531No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGAAGTAGCTCCGTATTAT10.5102040816326531No Hit
ACAGACAGGCCACCCAGGGCTCAGGCTGGGTATGGTGGGCTCTGGTGGGA10.5102040816326531No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTCGTAGTCGGACCG10.5102040816326531No Hit
TTTTTATTTTTATAAATAGTAAGGATTGCGTTTTTTCGTATGGTGTTTTG10.5102040816326531No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTTGGTAAC10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGGAGTCTAAGTAGTACTTACAACTGGTGGTACT10.5102040816326531No Hit
GTTTGTAATTTTAGTTTTTTTGGAGGTTGAGGTAGGAGAATCGTTCGAAT10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAACACTCCCTGAACCATAGTAATCCGG10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGGCGGAGGTTGTAGTGAGTTGAGATTATGT10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGGCGGAGGTTGTAGTGAGTCGAGATCGCGT10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGATTATATTGGGATTTTGGTGTTATTTTTAAATT10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAGGGGTAGCTCCCCTAGACAAGGCGGT10.5102040816326531No Hit
GTGGTCCCTTTGCCCCAGACGTCCATACGGTAGACGAAGCACTAACTGAG10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGAGATTCGGGTATAGGATTTTAAGATTTAG10.5102040816326531No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAGTTCTG10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAATAACCACTACTATCATATTG10.5102040816326531No Hit
GTTAAAATTTTGGGTTAAGGAGATTGATGTGTTGTCGTTTGTATTAAGAG10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGTACCAGCCACTGCTCTCGGCTCAA10.5102040816326531No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCCCCCGGGGAAATAACTCCCTG10.5102040816326531No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTACCCAGGTCCCTT10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGTTGGTTTGAGGAAGGATGAAAGATGGTAG10.5102040816326531No Hit
ATTGTAGAAAGATTTTGGGAGGTAGAGGTTATAGTGAGTTGAGATTATGT10.5102040816326531No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTTGGCGGATTGTGGGTGT10.5102040816326531No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTCCCGACC10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGGCGTTGAGAGGTTGAGTTTTTTTAAGATG10.5102040816326531No Hit
ATTGTAGAAAGAAGATTTAGTTTATTAGTGTGGGTGGAGGGTGTAGGAGT10.5102040816326531No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAGGCCCGCAT10.5102040816326531No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTAGGGGGATTATTTGAGT10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGGTGGAGGTTGTAGTGAGTTAGGATTACGT10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGGTAGAGGTTGTAATGAGTTTTGATTTTAT10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGGTAGAGGGTGAAGTGAGTTAAGATTATGT10.5102040816326531No Hit
GTTAAAATTTTGGGTTAAGGGGATCGATGCGTTGTTGTTTGTATTAAGAG10.5102040816326531No Hit
GTTAAAATTTTGGGGAAATGTTTTTTTTGGGGTTTTGGTTTATAGGTGGA10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAACGGTGCAGCTGGTACTACTCTCTC10.5102040816326531No Hit
ATTGTCCCTTGGCCCCAGAAATCAAAGCCATCATTGACATATAAAGTAGG10.5102040816326531No Hit
GTTAAAATTTTGGGTTAAGGAGATTGATGCGTTGTTGTTTGTATTAAGAG10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAATCAAGAAGCTGCTGCTTTCT10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGGGATAAGGTTTGTTTGGTTGTTTTTTGTTTA10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGCCCGCCAGGCCTCTCGCACAGTAATACAC10.5102040816326531No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGGAGTGTAATCTGACTCTCGC10.5102040816326531No Hit
TTTTTATTTTTATAAATAGTAAGGATTGTGTTTTTTTGTACGGCGTTTTG10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGTACTAC10.5102040816326531No Hit
GTTTGTAATTTTAGTTTTTTAGGTTTAAATTATTTTTTTATTTTATTTTT10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAATTAGAGGACACTCTTGCACAGTAAT10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGTTTAAGGTTAAAGTGAGTTGATTGAGTTA10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGAATCCCCAGTTAGAATCTTCTTT10.5102040816326531No Hit
GGTTTTTGAGAATTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTTGT10.5102040816326531No Hit
GGGGTCCCTTGGCCCCAGACGTCCATACAGTAGTAGTAGTAGTGGCCCCT10.5102040816326531No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGCGGAGGTAGGAGAATTATTTGAAT10.5102040816326531No Hit
GTTAAAATTTTGGGTTATTTTTTGAATTTATATTTTGATCGGAAGAGCGG10.5102040816326531No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAAAGCGCAGCTACCACCACAGACTC10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGAATGTGTTGGATAATTTTTATTTTAGGTT10.5102040816326531No Hit
ATTGTAGAAATAGTTTGGGAGGTTAAGGTTGTAGTGAGATTTGATTGAGT10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGATAAGAGTAAAATTTTATTTTAAGAAAAA10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGAAGGGGGTATTTGTGGGGGTGGGGAGTAT10.5102040816326531No Hit
GGTTTTTGAGGATTGGATTTTGAGTTTGTTTGTAAGGTGAGATGTTTTGT10.5102040816326531No Hit
GTTTGTAATTTTAGTTTTTTAGGAGGTTAAGGTAGGAGGATCGTTTGAGT10.5102040816326531No Hit
GTTTGTAATTTTAGTTTTTTGGAAGGTCGAGGTAGGAGGATTATTTGAGT10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGTAGTTAAGGGATAAAAGTTGTGATGATGG10.5102040816326531No Hit
ATTGTAGAAAGAGTTTGGGAGATAGAGTAAGATTTTATTTTAAAAAAAAA10.5102040816326531No Hit
GTTTGTAATTTTAGTTTTTTGGGAGGTTGAGGTAGGTGGATTATTTGAGG10.5102040816326531No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)