FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132206

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132206
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences142
Sequences flagged as poor quality0
Sequence length208
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCGCCTGCACTAAGAGAAACGCAACGAACAACTTTGTCAATGCATTGC85.633802816901409No Hit
CGATGTATCCAAGTCTGACGGCCCCAGAAACGGGTGTGCAGGGCGCCCAT64.225352112676056No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTACCCCTCCCCGAACCATAG32.112676056338028No Hit
CGGGTCACCTTCTGAATTTTTACCTTCATAAACAGCAAGGACTGCGCTCT32.112676056338028No Hit
AGGGTTCCCTGGCCCCAGTAGTCAACCATAGCTGTTCCCCTCACTCTCGC21.4084507042253522No Hit
GCCCTGTAATCCCAGCTCCCCGGGAGGCTGAGGTCGGCGGATCGTGGGTG21.4084507042253522No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGGGGAACCATAGCTGTAT21.4084507042253522No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGCCAGAGGAATAGCA21.4084507042253522No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCCATGGAATTAACCACTACTAT21.4084507042253522No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAAGCAGC21.4084507042253522No Hit
AGGGTTCCCTGGCCCCAGTGGACATCAGCTGCTGCCTCTCCATCTCTCGC21.4084507042253522No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGGCCGCAGTACCAGCCAATGCTCCG10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCACCGGGAGCCCCGGCTACCTG10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAACCTCCCCGACCCATAGTAAAGATC10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTCCCTCAAGTCAAA10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCCTCCCGTTAGCCCCGCGTACCA10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTACCAGCTGCTGCTACCCGGTCT10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCCCTGAACCACTACTATCATAGTAATCC10.7042253521126761No Hit
GCCCTGTAATCCCAGCTCCCCGGGAGGCTGAGGCAGGAGAATTGCTTGAA10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGACATCCCCGAATGGCCACTCCAAAAATCG10.7042253521126761No Hit
GCCCTGTAATCCCAGCTACCTGGGAGGCTGAGACTCTGTCTCAAAAAGAA10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAGAGGCCGGCGATCGACTCGCACAGTA10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGCCATGGGCCCT10.7042253521126761No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGGAGTAGAAGCCCACCCGTCG10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTATTGGAACGT10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGGGATAGCAGCTGGTTCCTATCTTGCACAGTAA10.7042253521126761No Hit
AGGGTTCCCAGGCCCCAGAAGTCAAAGAAGTTAGCTCCGTCGTTTGACCC10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATTGCG10.7042253521126761No Hit
GCCCTGTAATCCCAGCTACTCGAGATGCTGAGGCAGGAGAATTGCTTGAA10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGCGGATCTC10.7042253521126761No Hit
GAGGTCCCTTGGCCCCAGACGTCCATACCGAAGTAGTGGAATCCTATCTC10.7042253521126761No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAGTAGACCAC10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGCAGCAGTAGTAGTCATATCT10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGACGTAGTCACCGTAGGAATC10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTAATAATAACCAGTCAAAAT10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTATGAGCCAAAAAT10.7042253521126761No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAGTAATGGTC10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAGTGGGG10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAACGGGCCCAAGGCGAGAGTTCACCA10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATATCGTAGTAGTAGAAGTAAGGTTT10.7042253521126761No Hit
GCCCTGTAATCCCAGCTACTCAGAAGACTGAGGCAGGAGAATCGCTGGAA10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGGCCGCAGTACCAGCCACTGCTCCA10.7042253521126761No Hit
AGGGTTCCCTGGCCCGATCCTATAGCAGCTGGTACTACTACAATTGGAGG10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGCCGTAATAACTCCCCGAACCATAGTACGA10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGGCCAGAAAGTCCGCTCATTCTTTT10.7042253521126761No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGAAACGATAACAAAACCCAGACG10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAATAGTAGTAATATGG10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCAAAAGCATAGCACAAGAAGCAAGCACG10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAATTTACCACCGTAAGAACACAGCCGT10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAATCCCGAAC10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTATCCAGGAGGGGATAAAAC10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGTGTCCATTCAAGAACACTACTGTC10.7042253521126761No Hit
AGGGTGCCACGGCCCCACACATCGAAGTACCAGTTTTTGTTCCTCGCACA10.7042253521126761No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCCTCTTCACCAGCTGCTGC10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGCAGTAGTCGAGGGACAACCA10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGATATTATAACCACTCAGGTATCCCCTCGCACA10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTGGGGTCCTAGTGATAACCA10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGCTTCCCGACGTCGTCCCAGTTAT10.7042253521126761No Hit
GTGGTCCCCTGGCCCCAGACGTCCATGCCGTAGTAGTAAGGAGGGGGCCC10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTCCTGTTTATA10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGAAACCACT10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTGTCCCCCCGTCGCGATCGCTTT10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGTGGGAAAAAAGATTGACGATAACT10.7042253521126761No Hit
GTGGTCCCTTTGCCCCAGACGTCCATACCGCGGACGAGCTGCTCTCTCCC10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGCCCCATCCCCC10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGCCCTCGGT10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTATCTTGATCG10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGAGGACCCAAAAATCGTAATT10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTAGCCCTTATAATAACCACT10.7042253521126761No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAGTAATACTC10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCTCGAGCATACACCATTAGT10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAATAGTCGTAGTTTTCCTT10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTTTCGCATCTCCCAGTCCCCCGAACCCCCTAG10.7042253521126761No Hit
AGGGTTCCCTGGCCCCACGCAAAACCATAGCTGTAAAGATCCGCACAGTA10.7042253521126761No Hit
AGTGTCCCCTGGCCCCAGATATCAAAAGCTCCCACGTACTTCCAGTTACC10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGGACCCAAAGACATAGGGGTGGCAACTGGTCGT10.7042253521126761No Hit
GTGGTCTCTTGGCCCCAGACTTCCATAGCAGAAGACTTTTAGCAGTAACG10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAGGTCTG10.7042253521126761No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTAGTAGTCACC10.7042253521126761No Hit
AGGGTTCCCAGGCCCCAGTCTTGAGGAAGTACCAACTGCTGCTATTCCCA10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGACAAAGCCACTGCT10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGCCGTTAAGTCAGCCACTGCTTG10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAAACCCTGTA10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGGAGTCAAACCTCCCCGACCCATATTAAAGATC10.7042253521126761No Hit
GCGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGACTACGTA10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTATTGTTTATCCACGTGAAA10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTAGGACCAGTCAAAATATCGTAATCCTCC10.7042253521126761No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTGGGGACGAGC10.7042253521126761No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCGGAGTCACCGTAAGTCCG10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGGGGGCCACTCT10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAAGCCAC10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATGGGA10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGTTAGCTTCTTCTCCCTG10.7042253521126761No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCCCCATAACCATAGCTGTATCC10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGCCCCCCCGGAAAGGGTATAGCAG10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCGGCCCATCGGTTTCTCCACTAT10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAACCACTGGT10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTACCGGGCCGTAGTAGCTCCCAC10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACAGAGGGGCCGAGCTGCTATACG10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGAGTCCACTATAACAGGCCACCCC10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAAGGGCT10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTATTCGTAGTC10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTACGCCTCGCC10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGAGGTAATCGTAGTCAGCGTACCA10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTAGCAGCTACCACCTCTACA10.7042253521126761No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCACCACGTAGAATGCCCGCCAG10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTATGAACCCCA10.7042253521126761No Hit
TGTCGCCTGCACTAACAGCAAGGACTGCGGATCGGAAGAGCGGTTCAGCA10.7042253521126761Illumina Paired End PCR Primer 2 (95% over 22bp)
CTTCAAGAAGTCCTTTACCAGCTTTAGCCATAGCACCAGAAACAAAACTA10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGGAGTCAAGAGGACGAGTTGCTATACCCTTCCT10.7042253521126761No Hit
GCGGTCCCTTGGCCCCAGACGTCCATGGTAGAGCCGTAATAGAGGGGATC10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTACCAGCCACT10.7042253521126761No Hit
GTGGTCCCTCGGCCCCAGACGTCCATACCGTATGCCGAACCATAGTAATA10.7042253521126761No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTGGGGGAATAG10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGGGCCAGGGACTACCAGTCAA10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTCCTCAAT10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGTGTCCATTCAAGACCACTACTGTC10.7042253521126761No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGTCGTTCAAGTAGCTCCC10.7042253521126761No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGAGGGGACCCGTAAGGTT10.7042253521126761No Hit

[OK]Adapter Content

Adapter graph