FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132213

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132213
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1033
Sequences flagged as poor quality0
Sequence length208
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCGCCTGCACTAAGAGAAACGCAACGAACAACTTTGTCAATGCATTGC434.162633107454018No Hit
CGATGTATCCAAGTCTGACGGCCCCAGAAACGGGTGTGCAGGGCGCCCAT383.6786060019361084No Hit
CGGGTCACCTTCTGAATTTTTACCTTCATAAACAGCAAGGACTGCGCTCT333.1945788964181996No Hit
GCCCTGTAATCCCAGCTCCCCGGGAGGCTGAGGTCGGCGGATCGTGGGTG151.452081316553727No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTACTGGCAGCTGGT30.29041626331074544No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGCCCGAATAATAACCACTCCA30.29041626331074544No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGTTATCATAGCTGTATATGCTTC30.29041626331074544No Hit
AGGGTTCCCTGGCCCCAGTTGTTTTTATTTTTATTACAGAGTAACCACTC30.29041626331074544No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAAGGGACATCCACGAGTTGGGG20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTACCCCTTTCGTTTTGTGTA20.1936108422071636No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCGAATCGGGGGAAAGTAGCTCC20.1936108422071636No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTCTCCCGGAGT20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAAAACATAGCTGTATCCACGCTTCC20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTGGGGGGAACAAGTAGCTCCCACTGTAGG20.1936108422071636No Hit
CGGGTTCCCTGGCCCCAGTAGTCAAAGTAGAAGAGTCGTACCACGGCCAT20.1936108422071636No Hit
GTGCTCCCTTTGCCCCAGACGTCCACGTAGTAGTAGCCGGCAGCCCCAAA20.1936108422071636No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCACCCTCGTCGAATAGCAGCTG20.1936108422071636No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTTACCCTTATA20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTACTTGCCCCAAATCGCACA20.1936108422071636No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGCCAGAGGCACCAGG20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGTGGTTTCCGTCTCTCGC20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAACCCCCCGCGGAAGAGGGGCCAGCC20.1936108422071636No Hit
GTGGTCCCTTTGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATAAAG20.1936108422071636No Hit
AGGGCTCCCTGGCCCCAGAAGTCAAAGGAGTAACTACTTGGGTGATATCC20.1936108422071636No Hit
GTGGCCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTTGACGCCAGCCAC20.1936108422071636No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCATGCCCATAGCAGCTGGT20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTCCCCCATACGCGTACCAAATCCTGCGAA20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAATTCATAATTGTAGCCGTCTATTCC20.1936108422071636No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGGGATATCCACTGCT20.1936108422071636No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCACTCCCCTAATAACCAGT20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTACCACTGCGTAGCCCGGCTCAG20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTCCGTAAGACCAGCTGCTGCCTGGAGACT20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTAGTTAGCAGCTGCTGCCCC20.1936108422071636No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTACCCTCCTAA20.1936108422071636No Hit
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGTATCTATAACC20.1936108422071636No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTATTTATCACC20.1936108422071636No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCGTAGACACCACTAATGAT20.1936108422071636No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTCCTGGGTAATAAC20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGCCCTTGGGGTTCACTCTTGCACAGTAATA20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAATAACCACTACTATCATAGTAATA20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGTAGTACCCCGGGGGGTCGGGCCA20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCACCAAGAACCACTCCAAAAATC20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAAGCACCGCGGGTAATAAAGCCCTCCGTTCTCGC20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTCGAAGGGACCAAGAAGCGATCTCGCACA20.1936108422071636No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTCGCTCGTGGCCGGGTA20.1936108422071636No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATCGTA20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGAAGTCAAAGAGGCCAGCTGCTGCTCCCAAGCC20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGCGGGGATAACCAGTCAA20.1936108422071636No Hit
GTGGTCCCTTGGCCCCAGACGTCCACATCGTAGTAGTGGGAGAGTGGAAA20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGCTCGTAGTTCCAGTTTTAGGAAGGGGATCTCT20.1936108422071636No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATCGGA20.1936108422071636No Hit
GCCCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATTGCTTGGT20.1936108422071636No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTACCAAGACGA20.1936108422071636No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCCCCCCAGAAGGGCAGGTG20.1936108422071636No Hit
AGGCTTCCCTGGCCCCAGGGGTCGATCCAGTTGGGCCTATAAGTCCCCGA20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGAACCACTCCAAAAATCGTAAGG20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTTGTATCCGATTGGGGTCAC20.1936108422071636No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCATCATCGGAGTGGAGGAGGGA20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAAGGGAGCCAGCCTCCCACTCGCACA20.1936108422071636No Hit
ATTGTCCCTTGGCCCCAGATATCAAAAGCACCCGGAATACTGATCTCACC20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCTCCCTAACTCCCTGAACCATAG20.1936108422071636No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACAAGTTTCAGAGATAGCAGCTGG20.1936108422071636No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGGTCCAGTA20.1936108422071636No Hit
AGGGTTCCCTGGCCCCACTAGTCAAGGGTACCAGCCACTGGAATTGTGTC20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTCGTAATAACCACTACTATCATAGTAATA20.1936108422071636No Hit
AGGGTTCCCTGGCCCCAGTAGTCAAGGGGATAGCAGTCACCACCACAATA20.1936108422071636No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)