FastQCFastQC Report
Sat 10 Sep 2022
EGAF00001132222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1073129
Sequences flagged as poor quality0
Sequence length208
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGTCCCTTTGCCCCAGACGTCCATGTAGTAGTAGTAGGGATAGTGGAG145921.3597619671074028No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGTAGCAGCTGGTACTACTACA97080.904644269235106No Hit
ACAGGAGACTGTGACAGTGACGGTGACCACAGACAGGCCACCCAGGGCTC26050.2427480759535899No Hit
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTAGTAATATTT13160.12263204144142968No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)