FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001132226

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132226
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences741525
Sequences flagged as poor quality0
Sequence length208
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGTCCCTTGGCCCCAGACGTCCATACCGTAGTAGTAGTACCCCCACCC37170.5012642864367352No Hit
TCCCCAGTCAGGGTGAGTAGTGGTGGGGAGCCGGGCAGGGGCCCAGCCCT30730.4144162368092782No Hit
ACAGGAGACTGTGACAGTGACGGTGACCACAGACAGGCCACCCAGGGCTC25430.34294191025252013No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)