FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001132228

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132228
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences645329
Sequences flagged as poor quality0
Sequence length208
%GC57

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGTACTAC38926660.32054967311248No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGACCAG12712719.699564098312646No Hit
AGGGTGCCACGGCCCCAGAGATCGAAGTACCAGTAGCACAGCCTCTGCCC66651.0328065219446205No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGACCCG43290.6708206201797843No Hit
TCCCCAGTCAGGGTGAGTAGTGGTGGGGAGCCGGGCAGGGGCCCAGCCCT39400.6105412897917186No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGAACTAC32540.5042389230919423No Hit
ACAGGAGACTGTGACAGTGACGGTGACCACAGACAGGCCACCCAGGGCTC30890.47867056958543625No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGCACTAC25720.3985563952650508No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGAACAG19040.2950433034932569No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGCTGGGACTAC15640.24235699929803248No Hit
AGGGTTCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGACCAG12690.1966438824227642No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGCGATAGCAGCTGGTACTAC12540.19431948664944548No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGGCCAG11290.17494952187178942No Hit
TGGGGACAGGGACAGGTGGTCCTGGGATCAGGCTTCAGCTGCACGTCCTG10310.1597634694861071No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGACCAA9590.1486063697741772No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGACCAC9170.14209806160888477No Hit
CACACCAAGCTCAGAGAGGGCAGGGGTGGGAAGGAGACATCAGATGTGGG9100.14101334358133602No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCCGGAGATAGCAGCTGGTACTAC7400.1146701914837238No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGATCAG7400.1146701914837238No Hit
AGGGTTCCCTGGCCCCAGGGGTCGAACCAGGAGATAGCAGATGGTACTAC6610.1024283737442452No Hit
AGGGTGCCCTGGCCCCAGTGCTGGAAGTATTCATTTTTCGGCGGGCCCAG6510.1008787765620327No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)