FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132264

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132264
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences154
Sequences flagged as poor quality0
Sequence length151
%GC55

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC1912.337662337662337No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC1610.38961038961039No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT85.194805194805195No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC74.545454545454546No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC42.5974025974025974No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG31.948051948051948No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT31.948051948051948No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACC31.948051948051948No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT21.2987012987012987No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATT21.2987012987012987No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC21.2987012987012987No Hit
CTTANCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT21.2987012987012987No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTCATCGC21.2987012987012987No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGA21.2987012987012987No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG21.2987012987012987No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGAGCAGAC10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGGACCCTGGCCCCAATAGTCAAAGGC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCTTATA10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCAGCC10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGACATCAAAGC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCATGGTTCCCTGGCCCCAGACTCCCCCAC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGAGTTCCCGGGCCCCAGAAGTCAAAAC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCACGA10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCGCCC10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAT10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCACAGACAGGTCACCCAGGGCTCAGGCCG10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGCTAGGGCCCTTGGTACGGGCTGAGG10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCCCCT10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGGACCCTGGCCCCCATAGTCAAAGGC10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCAACAC10.6493506493506493No Hit
CTTACCTGAGGAGCCTGGCGGACCAGATCGGAAGAGCACACGTCTGAACT10.6493506493506493Illumina Multiplexing PCR Primer 2.01 (100% over 26bp)
CTTACCTGAGGAGACGGTGACCAGGGTTCCACGGCCCCAGTGATCGAAGT10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCCAGGAAGGGGCTCTGGTGCCGGCATGAG10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACTTCCATAC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTTAAGGGGGT10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAGGCG10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAC10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAATGGTCAAATC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGCCCACTAGTA10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCTGGGTTCCCTGGCCCCAGATCCCACCAA10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGACGTCAATAC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCATTGTTCCCTGGCCCCAGGTATCAAACC10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGAGGG10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGAA10.6493506493506493No Hit
GTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCCCAGGCTGTCCTGCAGGACCAGGGACAA10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCACCCT10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATCC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAT10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAGCTC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATGC10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCAAACG10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCAGAC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGGCCTAGT10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCTGTTG10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGAAGTCCATAC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATTC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCTTTG10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGTTTTTAGGA10.6493506493506493No Hit
CTTCCCTGGGGCTGACGGATCCAAGATCGGAAGAGCACACGTCTGAACTC10.6493506493506493Illumina Multiplexing PCR Primer 2.01 (100% over 27bp)
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATTA10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATGTCAAAAG10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCACGGTTCCCTGGCCCCAGTAGTCAAAGA10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATCC10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCACACC10.6493506493506493No Hit
CTTANCTGAGGAGAGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATACC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCACAGGTGGAGAACACCGACAGCATCCTT10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCGGGGTCCCCTGGCCCCAGGGGTCGAAAC10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAA10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGGACGTGA10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAT10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACCC10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACATCCATAC10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACG10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAGAAT10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCGAAAA10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCGAACC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACCG10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGACGTCCATGC10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCTGGGTACCCTGGCCCCGGAAGGGAAAGT10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGGACC10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCGTAAA10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATG10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAAACGTCCATAC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATA10.6493506493506493No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATAC10.6493506493506493No Hit
CTTACCTGAGGAGACGGTGACCGGGGTCCCTTGGCCCCAGACGTCCATAC10.6493506493506493No Hit

[OK]Adapter Content

Adapter graph