FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199
Sequences flagged as poor quality0
Sequence length151
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC147.035175879396985No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC84.0201005025125625No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC73.5175879396984926No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT73.5175879396984926No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT73.5175879396984926No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT42.0100502512562812No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG31.507537688442211No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAG31.507537688442211No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCATCGT21.0050251256281406No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG21.0050251256281406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC21.0050251256281406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCAAAAT21.0050251256281406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG21.0050251256281406No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTCGGCCCCAGACGTCCATAC21.0050251256281406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAT21.0050251256281406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAT21.0050251256281406No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACC21.0050251256281406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACA21.0050251256281406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGGT21.0050251256281406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATC21.0050251256281406No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTTGTCCCTTGGCCCCAGATTTCCATAC10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATAG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATAC10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGGGAAACT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGTGTTCCCTGGCCCCAGTAGTCATAGT10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGGCAAAAT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGAGGTCCATAT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAATG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGATGTCAAACG10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCTCCGT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGCTCCCTGGCCCCAGTACTCGAGGG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCTGGGCTCCCTGGCCCCAGTACTGACAAC10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCCAGT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCATTGTTCCCTGGCCCCAGATATCAAAAG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCAAACA10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGGGGTTCCCTGGCCCCAGTAGTCAATGC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACAG10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGAGTG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCTCTGGCCCCAGTAGTCAAAGT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCACAGGTGACTGTGACCGTGACGGTGACC10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGCCCATAC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCCAGAT10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCACAGACAGCCCACCCCAGGATCGGACGG10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTTCAACC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCAAACG10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCAAACC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGAAGTCAAAAG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCGTAC10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACAT10.5025125628140703No Hit
CTTACCTGAGGATACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATTT10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGAAGTCAAAGG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTCTTCCAATC10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCATGGCCCCAGAGATCGAAAT10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGACGTCCATAC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGGCCAGGC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGATTATCT10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCACAT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCATTTC10.5025125628140703No Hit
CTTANCTGAGGAGACAGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGGG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATCC10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAT10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGACGTCCACAC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTCAATGT10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTCCCCTTGCCCCAGAAGTCAAGGA10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTCCCCTGGCCCCAGTAGTCAACAG10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACCC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCCGGCCCCAGTAATCGAAAT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGACGTCCACAC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGTTCTGCAG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCATGGCCCCAGAGATCAAATG10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCATAAGTCCCACC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGATATGTAGCAGCTGGT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCTTAC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCAGGCCCCAGGGAGGGCCAG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACCG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGGGGTCCCTTGGCCCCAGACGTCCATAC10.5025125628140703No Hit
ATTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCGAAT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGAAGTCAAAGA10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATTAAGGT10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCAATA10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGATCC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATGT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTTGCCCCAGTAGTCAAAGA10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGACTCAAAAC10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGAAGTCCATAC10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCAAAGT10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTGCCATGGCCCCAGAGGTCGAAAT10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGAAGTCCAACA10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCTTAAACTCCTTGGACCAGCTGTCCACAC10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCACGGGAGCCTGTGACCGTGGGGGTGACC10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGAGTTCCCTGGCCCCAGTAGTCATGGT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTTGCCCCAGACATCAATAG10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGTGAT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTGGTTCCCTGGCCCCAGACGCCGATAT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTCGTAGTTATGGTGCGTAGTGGCGGGG10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAGAGT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGGGCACGC10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAA10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCAAAGT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGTGTTGGAAGT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAATCAGGCG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGAGGAGACTGTGACAGGTACGGAGACC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGAACG10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCAAAGG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGAGACACGGCACCCAGGGGACGGTATG10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCAAAGG10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATT10.5025125628140703No Hit
CTTACCTGAGGAGACGTGACCAAGGTTCCCTTGGCCCAGGGGTCGAACCA10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCCCAA10.5025125628140703No Hit
ATTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGGACCCCC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCAAAGT10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCGGGGTTCCCTGGCCCCAGGAATCCATGC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGAAATCAAAAT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGGGGTGCCACGGCCCCAGACGTCGATGT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGTCGTCCATAC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAATAG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGGGGTCCCTTTGCCCCAGAAGTCAGGGT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAAGCATAGG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTGGGCCCCAGACGTCCATAC10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCGTGGTGCCCTGGCCCCAGTCCTCCATAC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAAGC10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACG10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGGGGGTAG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAACCCTGGG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTACCTCAGGT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCCAAGCTACCCTGCCCTACCTGGATTCAT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCATTGCACCTTGGCCGCAGATATCAAGGG10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGCCGC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGACGTCCATGG10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTCCCCTGGCCCCAGACGTCCATGC10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGGT10.5025125628140703No Hit
CTTACCTGAGGAGACGGTGACCATGGTTCCCTGGCCCCAGTAGTCAATAT10.5025125628140703No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCCTGGCCCCAGATGTCAAAAG10.5025125628140703No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)