FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001132281

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001132281
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1887
Sequences flagged as poor quality0
Sequence length151
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC1548.161102278749338No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAC1005.299417064122947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT542.8616852146263914No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC472.4907260201377848No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGT341.8018018018018018No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG281.483836777954425No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACC231.2188659247482776No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGC191.00688924218336No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG160.8479067302596714No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT140.7419183889772125No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAG130.688924218335983No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGA100.5299417064122947No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAC90.47694753577106513No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAT90.47694753577106513No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACC90.47694753577106513No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGT80.4239533651298357No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGC70.37095919448860626No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGA70.37095919448860626No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGC70.37095919448860626No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACC70.37095919448860626No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGACGTCCATAC60.3179650238473768No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC60.3179650238473768No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAGG60.3179650238473768No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAT60.3179650238473768No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATAC60.3179650238473768No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAT60.3179650238473768No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCAATAC50.2649708532061473No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATGT50.2649708532061473No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATC50.2649708532061473No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAT50.2649708532061473No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAG50.2649708532061473No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATCC50.2649708532061473No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATGT40.21197668256491786No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTTGCCCCAGGGGTCGAACC40.21197668256491786No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACCG40.21197668256491786No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATGG40.21197668256491786No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATGC40.21197668256491786No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATT40.21197668256491786No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACG40.21197668256491786No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACGC40.21197668256491786No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACT40.21197668256491786No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAAAC40.21197668256491786No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATGC40.21197668256491786No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGAAGT30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCAAAC30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATGC30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCGTTGTCCCTTGGCCCCAGACGTCCATAC30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATT30.1589825119236884No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGAACG30.1589825119236884No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAATAG30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAATAC30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCAAACC30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCACAGT30.1589825119236884No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCACAGT30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAAAA30.1589825119236884No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCAAAGC30.1589825119236884No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCAAAGT30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGACATCAAAAG30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGAT30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACT30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGACGTCCATAC30.1589825119236884No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTTGCCCCAGACGTCCATGC30.1589825119236884No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATGT30.1589825119236884No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACA30.1589825119236884No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACG30.1589825119236884No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAACT30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAA30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAG30.1589825119236884No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGCGTCGAACC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATGTCAAAAC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGAGGTCGAAGT20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGAACC20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTCGAACC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATTC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACTT20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCAAAGT20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCTCGG20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAGAAT20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATG20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCACTCT20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGAGTCCAACC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCATTGTCCCTTGGCCCCAGATATCAAAAT20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAACG20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTCGAAGT20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGTA20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATAG20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACAC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGCCCAGGGTTCCCTGGCCCCAGTAGTCAAAGT20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCGACG20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCAAGC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCATGGTTCCCTGGCCCCAGGGGTCGAACC20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTCAAAGC20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCAGGGTGCCATGGCCCCAGAGGTCGAAGT20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATA20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAATG20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAACGT20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCACAC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCATAC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGAG20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGAC20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCATAG20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTCGTCCAATC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTGGTCAAACG20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCACACC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGCCGAAAT20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCAAAC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGACGTCCATAT20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGACGTCCAACC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAAGT20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCGAAGC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATAA20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGGT20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCCAAGT20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCGTGGCCCCAGTAGTCAAAGA20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGAAGC20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCAATAC20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCCTGGCCCCAGACGTCCATAC20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCATTGTCCCCTGGCCCCAGAAATCAAAAT20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTCGTCAAACC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGCCCC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCGTGGCCCCTTGGCCCCAGACGTCCATAC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGACGTCAAAAG20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAATGA20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGAAGTCCATAC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGATGTCCATAC20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCGTGGTCCCTTGGCCCCAGACGTCCAAAC20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCGAATC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGATGTCAATAG20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCAGGGTGCCACGGCCCCAGAGATCGAAGT20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGGGGTCAAACC20.10598834128245893No Hit
CTTACCTGAGGAGACGGTGACCATGGTCCCTTGGCCCCAGACGTCCAAAC20.10598834128245893No Hit
CTTANCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTAGTCAAGGG20.10598834128245893No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)